RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ATP13A5Q4VNC0 1218 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 KHDRBS2Q5VWX1 349 aaKnown RBP14.16□□□□□ -0.14
CHD1-212ENST00000614616 SATL1Q86VE3 508 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 FEZF2Q8TBJ5 459 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 GPATCH1Q9BRR8 931 aaKnown RBP14.16□□□□□ -0.14
CHD1-212ENST00000614616 SLC39A10Q9ULF5 831 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 SHOC2Q9UQ13 582 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 RUVBL2Q9Y230 463 aaKnown RBP14.16□□□□□ -0.14
CHD1-212ENST00000614616 GSTK1Q9Y2Q3 226 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 AP4B1Q9Y6B7 739 aa14.16□□□□□ -0.14
CHD1-212ENST00000614616 BAZ2AQ9UIF9 1905 aaKnown RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 FARP2O94887 1054 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 ITGAXP20702 1163 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 SSTR3P32745 418 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 STAT5AP42229 794 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 MCAMP43121 646 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 STAT5BP51692 787 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 USP4Q13107 963 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 TAF8Q7Z7C8 310 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 HTRA1Q92743 480 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 MTSS1O43312 755 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 ZC2HC1CQ53FD0 456 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 PKN3Q6P5Z2 889 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 EIF2AK1Q9BQI3 630 aaKnown RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 LOC110117498-PIK3R3F6TDL0 507 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 TGM2P21980 687 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 GRM4Q14833 912 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 DUOXA2Q1HG44 320 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 PYDC2Q56P42 97 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 PHACTR1Q9C0D0 580 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 RABL2AQ9UBK7 228 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 GNPTGQ9UJJ9 305 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 EIF3LQ9Y262 564 aaKnown RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 PCDHGA10Q9Y5H3 936 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 ZBTB5O15062 677 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 HS6ST1O60243 411 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 CCR3P51677 355 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 ZHX1-C8orf76Q96EF9 292 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 NDFIP2Q9NV92 336 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 ZSCAN5CA6NGD5 496 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 RBAKQ9NYW8 714 aaPredicted RBP14.15□□□□□ -0.14
CHD1-212ENST00000614616 MYL4P12829 197 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 SLC27A3Q5K4L6 730 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 PMF1Q6P1K2 205 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 CACTIN-AS1Q8N1I8 211 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 EXD1Q8NHP7 514 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 CD274Q9NZQ7 290 aa14.15□□□□□ -0.14
CHD1-212ENST00000614616 PRPF4O43172 522 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■■■□□ 17.3
CHD1-212ENST00000614616 KPNA1P52294 538 aaPredicted RBP14.14□□□□□ -0.15
CHD1-212ENST00000614616 NSMCE2Q96MF7 247 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 ASAP1Q9ULH1 1129 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SDR42E2A6NKP2 422 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 DCXO43602 365 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SPDYE7PQ495Y7 208 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 ACAT2Q9BWD1 397 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SRP68Q9UHB9 627 aaKnown RBP14.14□□□□□ -0.15
CHD1-212ENST00000614616 CHKBQ9Y259 395 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PDLIM1O00151 329 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
CHD1-212ENST00000614616 LYNP07948 512 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 CCNCP24863 283 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 RPA1P27694 616 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 C2CD6Q53TS8 623 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 TNFAIP8L3Q5GJ75 292 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 DENND5AQ6IQ26 1287 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 HSD17B4P51659 736 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PRKAA1Q13131 559 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 NME3Q13232 169 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 CCNG2Q16589 344 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SLCO6A1Q86UG4 719 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 MAP3K14Q99558 947 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SMARCAD1Q9H4L7 1026 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 KANSL2Q9H9L4 492 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PCDHA6Q9UN73 950 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 HPSEQ9Y251 543 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 PCDHA8Q9Y5H6 950 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 ANXA6P08133 673 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 DENND1BQ6P3S1 775 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 FAM118BQ9BPY3 351 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 AS3MTQ9HBK9 375 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 CHORDC1Q9UHD1 332 aaPredicted RBP14.14□□□□□ -0.15
CHD1-212ENST00000614616 TMCC3Q9ULS5 477 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 MAGI3Q5TCQ9 1506 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 KRT33BQ14525 404 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 QPCTQ16769 361 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 CRTC3Q6UUV7 619 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 AGAP3Q96P47 875 aa14.14□□□□□ -0.15
CHD1-212ENST00000614616 SEPHS2Q99611 448 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms