RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PCDHGC3Q9UN70 934 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 SAT1P21673 171 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 TTC39BQ5VTQ0 682 aaPredicted RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 CAND1Q86VP6 1230 aaKnown RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 CCNJLQ8IV13 435 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 KBTBD2Q8IY47 623 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 NIPA2Q8N8Q9 360 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 ALKBH8Q96BT7 664 aaKnown RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 CLMNQ96JQ2 1002 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 AGAP3Q96P47 875 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 NIFKQ9BYG3 293 aaKnown RBP14.58□□□□□ -0.08
COL6A1-207ENST00000612273 SAR1AQ9NR31 198 aa14.58□□□□□ -0.08
COL6A1-207ENST00000612273 CCDC189A1A4V9 331 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 USP12O75317 370 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 LCP1P13796 627 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 ADORA2BP29275 332 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 CCDC142Q17RM4 750 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 GOLGA7BQ2TAP0 167 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 HSF5Q4G112 596 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-207ENST00000612273 PPM1JQ5JR12 505 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 IER5Q5VY09 327 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 PHC3Q8NDX5 983 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 PYDC1Q8WXC3 89 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 SKA1Q96BD8 255 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 SNRNP25Q9BV90 132 aaKnown RBP14.57□□□□□ -0.08
COL6A1-207ENST00000612273 KLC2Q9H0B6 622 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 USP29Q9HBJ7 922 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 ZNF358Q9NW07 568 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 PIM2Q9P1W9 311 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 TTLL3Q9Y4R7 772 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 E7ESA3 106 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 APOL1O14791 398 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 PPEF2O14830 753 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 ITM2AO43736 263 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 WFS1O76024 890 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 C6orf222P0C671 652 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-207ENST00000612273 NCF2P19878 526 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-207ENST00000612273 ZNF333Q96JL9 665 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 LGMNQ99538 433 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 DHRS4Q9BTZ2 278 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 MAN1C1Q9NR34 630 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 ETNK2Q9NVF9 386 aa14.57□□□□□ -0.08
COL6A1-207ENST00000612273 CORO1CQ9ULV4 474 aaPredicted RBP14.57□□□□□ -0.08
COL6A1-207ENST00000612273 WDR27A2RRH5 827 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 SDC4P31431 198 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
COL6A1-207ENST00000612273 TFDP2Q14188 446 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 KCNJ11Q14654 390 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PPP1R26Q5T8A7 1209 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-207ENST00000612273 MOB2Q70IA6 237 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 CRLF3Q8IUI8 442 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 GSTCDQ8NEC7 633 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 FAM149B1Q96BN6 582 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 OTUD5Q96G74 571 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 CNPY3Q9BT09 278 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 ZNF143P52747 638 aaPredicted RBP14.56□□□□□ -0.08
COL6A1-207ENST00000612273 RABGGTBP53611 331 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 SLC18A1P54219 525 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PDE1BQ01064 536 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 SLC34A1Q06495 639 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 CCDC14Q49A88 953 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 RALGPS1Q5JS13 557 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 RIPOR1Q6ZS17 1223 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 FAM131BQ86XD5 332 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 TEKT4Q8WW24 435 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PGBD4Q96DM1 585 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 TSC22D3Q99576 134 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PLLPQ9Y342 182 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 ACKR2O00590 384 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 Q3C1V9 767 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PPP1R2P3Q6NXS1 205 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 METTL7BQ6UX53 244 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 IZUMO2Q6UXV1 221 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 MAP7D3Q8IWC1 876 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 PQLC3Q8N755 202 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 OR6B3Q8NGW1 331 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 POPDC2Q9HBU9 364 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 DNAJC16Q9Y2G8 782 aa14.56□□□□□ -0.08
COL6A1-207ENST00000612273 SLC15A5A6NIM6 579 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 ABLIM1O14639 778 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 MAP3K7O43318 606 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 CILPO75339 1184 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 RFPL1O75677 317 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 NPTXRO95502 500 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 GNAT1P11488 350 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 IL4RP24394 825 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 AP3M2P53677 418 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 MCCD1P59942 119 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 STX3Q13277 289 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 MXD4Q14582 209 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-207ENST00000612273 KCNT2Q6UVM3 1135 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 KIF12Q96FN5 646 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 PHACTR1Q9C0D0 580 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 PCDH18Q9HCL0 1135 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 PAK5Q9P286 719 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 BRCA2P51587 3418 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 C2CD4BA6NLJ0 364 aa14.55□□□□□ -0.08
COL6A1-207ENST00000612273 SPECC1L-ADORA2AF8WAN1 911 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms