RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 LRCH1Q9Y2L9 728 aa7.1□□□□□ -1.27
SYNPO2-206ENST00000610556 NR2E3Q9Y5X4 410 aa7.1□□□□□ -1.27
SYNPO2-206ENST00000610556 PPP1R12AO14974 1030 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PRPF4O43172 522 aaKnown RBP eCLIP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 DCXO43602 365 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TBC1D12O60347 775 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PLA2G6O60733 806 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 LYPLA1O75608 230 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TRUB2O95900 331 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PROCP04070 461 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TPH1P17752 444 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 IL1R2P27930 398 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 GNL1P36915 607 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SKIV2L2P42285 1042 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 GSCP56915 257 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 CCNA1P78396 465 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 DSG1Q02413 1049 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SLC12A1Q13621 1099 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PDK2Q15119 407 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PDCD2Q16342 344 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 HSDL1Q3SXM5 330 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ARL13BQ3SXY8 428 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MSS51Q4VC12 460 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 WLSQ5T9L3 541 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 COLGALT1Q8NBJ5 622 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 CMTM5Q96DZ9 223 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ACO2Q99798 780 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 B3GNT5Q9BYG0 378 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 FRMD8P1Q9BZ68 369 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SPATC1LQ9H0A9 340 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TRPV6Q9H1D0 765 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 CDT1Q9H211 546 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ACSS2Q9NR19 701 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 BARX2Q9UMQ3 279 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 HES2Q9Y543 173 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 DOT1LQ8TEK3 1739 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MAGEA13PA6NCF6 341 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 EEF2KO00418 725 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 KIF3CO14782 793 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 CASQ2O14958 399 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 GSC2O15499 205 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ZNF286BP0CG31 522 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ERVK-10P10266 1014 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 RALBP11234 206 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TGM2P21980 687 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 WNT7BP56706 349 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PARP6Q2NL67 630 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 HABP4Q5JVS0 413 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 FAM183BPQ6ZVS7 135 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SERAC1Q96JX3 654 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 FSD1LQ9BXM9 530 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SUDS3Q9H7L9 328 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ZNF395Q9H8N7 513 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MAN1C1Q9NR34 630 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ETNK2Q9NVF9 386 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 NMRK1Q9NWW6 199 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ZMYND8Q9ULU4 1186 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 KLRG2A4D1S0 409 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 USP1O94782 785 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MT-CO1P00395 513 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ATP4AP20648 1035 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 IVDP26440 423 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 KLRC2P26717 231 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SPRP35270 261 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 GTF2A2P52657 109 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 RTP1P59025 263 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 STX1BP61266 288 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 ARHGAP8P85298 464 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 PTP4A2Q12974 167 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 RHBDF2Q6PJF5 856 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 TRIM67Q6ZTA4 783 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 APPL2Q8NEU8 664 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 GABPB2Q8TAK5 448 aaPredicted RBP7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 SLCO2A1Q92959 643 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 FBXL18Q96ME1 805 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MID2Q9UJV3 735 aa7.09□□□□□ -1.27
SYNPO2-206ENST00000610556 MYH11P35749 1972 aa7.09□□□□□ -1.28
SYNPO2-206ENST00000610556 DYNC1LI2O43237 492 aaPredicted RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 GLRA3O75311 464 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 LGR5O75473 907 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 CPA3P15088 417 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 AKAP5P24588 427 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ACAT1P24752 427 aaKnown RBP7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC1A6P48664 564 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SP2Q02086 613 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 STILQ15468 1287 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 KIF19Q2TAC6 998 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 EFHC1Q5JVL4 640 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 C4orf50Q6ZRC1 276 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 ANKS1BQ7Z6G8 1248 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 IPMKQ8NFU5 416 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 AFG1LQ8WV93 481 aa7.08□□□□□ -1.28
SYNPO2-206ENST00000610556 SLC10A4Q96EP9 437 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms