RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 VPS16Q9H269 839 aa25.37■■□□□ 1.65
UBE2E3-213ENST00000602959 PLCB1Q9NQ66 1216 aa25.37■■□□□ 1.65
UBE2E3-213ENST00000602959 OLA1Q9NTK5 396 aaKnown RBP25.37■■□□□ 1.65
UBE2E3-213ENST00000602959 RASAL2Q9UJF2 1139 aa25.37■■□□□ 1.65
UBE2E3-213ENST00000602959 PROB1E7EW31 1015 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 STC2O76061 302 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 EGFP01133 1207 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 EIF2DP41214 584 aaKnown RBP25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 ANO6Q4KMQ2 910 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 LY6G5CQ5SRR4 150 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 ANKRD20A12PQ8NF67 263 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 BPIFA3Q9BQP9 254 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 HSD3B7Q9H2F3 369 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 ABCC13Q9NSE7 274 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 MARCH2Q9P0N8 246 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 LIMA1Q9UHB6 759 aaKnown RBP25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 STRIP2Q9ULQ0 834 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 FHOD1Q9Y613 1164 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 ATG2BQ96BY7 2078 aa25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 ZFHX2Q9C0A1 2572 aaPredicted RBP25.36■■□□□ 1.65
UBE2E3-213ENST00000602959 PAPSS2O95340 614 aaPredicted RBP25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 UCHL3P15374 230 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 ACADSBP45954 432 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 COPB1P53618 953 aaKnown RBP25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 CSTF1Q05048 431 aaKnown RBP25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 PTK2Q05397 1052 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 FBXO43Q4G163 708 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 EZH1Q92800 747 aaPredicted RBP25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 SLC4A5Q9BY07 1137 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 SPHK2Q9NRA0 654 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 PCDHGC3Q9UN70 934 aa25.35■■□□□ 1.65
UBE2E3-213ENST00000602959 PIK3R2O00459 728 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 HOXC11O43248 304 aaPredicted RBP25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 TDGF1P13385 188 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 CLCN1P35523 988 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 GAD2Q05329 585 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 RAPGEF1Q13905 1077 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 DRAP1Q14919 205 aaPredicted RBP25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 FKBP15Q5T1M5 1219 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 AOPEPQ8N6M6 819 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 NELL1Q92832 810 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 DCLK3Q9C098 648 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 CYTH4Q9UIA0 394 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 ZNF510Q9Y2H8 683 aa25.34■■□□□ 1.65
UBE2E3-213ENST00000602959 LRRC10BA6NIK2 292 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 LTFP02788 710 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 PNMA6AP0CW24 399 aaPredicted RBP25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 PTMSP20962 102 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 CXCL12P48061 93 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 SATB1Q01826 763 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 PPP2R5DQ14738 602 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 MSANTD2Q6P1R3 559 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 SLC47A2Q86VL8 602 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 C12orf40Q86WS4 652 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 CLEC4CQ8WTT0 213 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 RNF139Q8WU17 664 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 EDEM1Q92611 657 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 GANQ9H2C0 597 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 ST7Q9NRC1 585 aa25.33■■□□□ 1.65
UBE2E3-213ENST00000602959 USP34Q70CQ2 3546 aa25.33■■□□□ 1.64
UBE2E3-213ENST00000602959 LGALS16A8MUM7 142 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 SART1O43290 800 aaKnown RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 RNF40O75150 1001 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 KLKB1P03952 638 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 HOXD11P31277 338 aaPredicted RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 BPIFB4P59827 614 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 PDCLQ13371 301 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 ZC3H14Q6PJT7 736 aaKnown RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 APTXQ7Z2E3 356 aaKnown RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 TMEM110Q86TL2 294 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 TMEM25Q86YD3 366 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 ETFBKMTQ8IXQ9 262 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 PLD4Q96BZ4 506 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 FUCA2Q9BTY2 467 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 FAM126AQ9BYI3 521 aaPredicted RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 STK33Q9BYT3 514 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 LHX5Q9H2C1 402 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 MARK1Q9P0L2 795 aa25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 HBS1LQ9Y450 684 aaKnown RBP25.32■■□□□ 1.64
UBE2E3-213ENST00000602959 SLC12A8A0AV02 714 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 CHURC1-FNTBB4DL54 471 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 CORO1AP31146 461 aaKnown RBP25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 SLC6A11P48066 632 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 TRIP4Q15650 581 aaPredicted RBP25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 PKN3Q6P5Z2 889 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 TSSK4Q6SA08 328 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 FMNL3Q8IVF7 1028 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 SCUBE3Q8IX30 993 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 GOLGA1Q92805 767 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 PNKPQ96T60 521 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 MIS12Q9H081 205 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 C2orf42Q9NWW7 574 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 SIK3Q9Y2K2 1263 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 DAAM1Q9Y4D1 1078 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 PCDHGA2Q9Y5H1 932 aa25.31■■□□□ 1.64
UBE2E3-213ENST00000602959 E5RJQ4 531 aa25.3■■□□□ 1.64
UBE2E3-213ENST00000602959 F8VZ95 297 aa25.3■■□□□ 1.64
UBE2E3-213ENST00000602959 PAPSS1O43252 624 aaPredicted RBP25.3■■□□□ 1.64
UBE2E3-213ENST00000602959 ATG13O75143 517 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms