RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 FANCCQ00597 558 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 NR1I3Q14994 352 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 LRSAM1Q6UWE0 723 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 KIAA1958Q8N8K9 716 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 EPS8L1Q8TE68 723 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 SLC20A1Q8WUM9 679 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 PPP1R13BQ96KQ4 1090 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 CDK5RAP1Q96SZ6 601 aaKnown RBP15.93■□□□□ 0.14
LIG1-219ENST00000600055 PDCL3Q9H2J4 239 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 TSPY26PQ9H489 355 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 ABCC13Q9NSE7 274 aa15.93■□□□□ 0.14
LIG1-219ENST00000600055 MRPS17Q9Y2R5 130 aaKnown RBP15.93■□□□□ 0.14
LIG1-219ENST00000600055 SLC9A3R1O14745 358 aaPredicted RBP15.92■□□□□ 0.14
LIG1-219ENST00000600055 STC2O76061 302 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 KLKB1P03952 638 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 ERBB2P04626 1255 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 CYP17A1P05093 508 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 FYNP06241 537 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 STAT1P42224 750 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 DHCR24Q15392 516 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 GAB4Q2WGN9 574 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 RHBDF2Q6PJF5 856 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 HTR3DQ70Z44 454 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 FMNL3Q8IVF7 1028 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 PRSS33Q8NF86 280 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 RNF139Q8WU17 664 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 MSANTD3Q96H12 275 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 PIWIL1Q96J94 861 aaKnown RBP15.92■□□□□ 0.14
LIG1-219ENST00000600055 NELL2Q99435 816 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 OSBPL6Q9BZF3 934 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 FBRSL1Q9HCM7 1045 aaKnown RBP15.92■□□□□ 0.14
LIG1-219ENST00000600055 RBM12Q9NTZ6 932 aaKnown RBP15.92■□□□□ 0.14
LIG1-219ENST00000600055 TBC1D14Q9P2M4 693 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 NOCTQ9UK39 431 aaKnown RBP15.92■□□□□ 0.14
LIG1-219ENST00000600055 DAAM1Q9Y4D1 1078 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 KMT2EQ8IZD2 1858 aa15.92■□□□□ 0.14
LIG1-219ENST00000600055 MSI1O43347 362 aaKnown RBP15.91■□□□□ 0.14
LIG1-219ENST00000600055 CHRNB1P11230 501 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 CHRNB2P17787 502 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 GALK1P51570 392 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 COG7P83436 770 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 ARID5AQ03989 594 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 GOLGA8FQ08AF8 430 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 GOLGA8DPQ0D2H9 430 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 NR1H3Q13133 447 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 TAF5Q15542 800 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 PTPN20Q4JDL3 420 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 LY6G5CQ5SRR4 150 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 Q6ZNB5 142 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 CACNA2D4Q7Z3S7 1137 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 DTWD2Q8NBA8 298 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 FAM149B1Q96BN6 582 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 LMAN1LQ9HAT1 526 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 OLA1Q9NTK5 396 aaKnown RBP15.91■□□□□ 0.14
LIG1-219ENST00000600055 LSM7Q9UK45 103 aaKnown RBP15.91■□□□□ 0.14
LIG1-219ENST00000600055 STRIP2Q9ULQ0 834 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 NAALADL1Q9UQQ1 740 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 HCN4Q9Y3Q4 1203 aa15.91■□□□□ 0.14
LIG1-219ENST00000600055 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
LIG1-219ENST00000600055 NCAM1P13591 858 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 CORO1AP31146 461 aaKnown RBP15.9■□□□□ 0.14
LIG1-219ENST00000600055 CDH5P33151 784 aaPredicted RBP15.9■□□□□ 0.14
LIG1-219ENST00000600055 UBASH3AP57075 661 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 FMO1Q01740 532 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 OR6B2Q6IFH4 312 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 FSTL4Q6MZW2 842 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 MSANTD2Q6P1R3 559 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 FAM183BPQ6ZVS7 135 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 TMEM25Q86YD3 366 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 TMEM35BQ8NCS4 154 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 BAP1Q92560 729 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 GOLGA1Q92805 767 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 NOX5Q96PH1 765 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 CEP83Q9Y592 693 aa15.9■□□□□ 0.14
LIG1-219ENST00000600055 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 TRDMT1O14717 391 aaKnown RBP15.89■□□□□ 0.13
LIG1-219ENST00000600055 NCAM2O15394 837 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 SART1O43290 800 aaKnown RBP15.89■□□□□ 0.13
LIG1-219ENST00000600055 GRAP2O75791 330 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 ADH5P11766 374 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 OPRD1P41143 372 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 SLC6A11P48066 632 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 CDR2Q01850 454 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 TCF15Q12870 199 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 C2CD6Q53TS8 623 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 TMEM196Q5HYL7 178 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 SYPL2Q5VXT5 272 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 NAA35Q5VZE5 725 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 C1orf228Q6PIY5 440 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 C12orf40Q86WS4 652 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 DENND1CQ8IV53 801 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 ADAM32Q8TC27 787 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 DQX1Q8TE96 717 aaKnown RBP15.89■□□□□ 0.13
LIG1-219ENST00000600055 CPA5Q8WXQ8 436 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 OTUB2Q96DC9 234 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 PCDHB18PQ96TA0 734 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 P2RY13Q9BPV8 354 aa15.89■□□□□ 0.13
LIG1-219ENST00000600055 SPHK2Q9NRA0 654 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms