RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 ULBP1Q9BZM6 244 aa16.21■□□□□ 0.19
XRCC1-206ENST00000597811 ACP6Q9NPH0 428 aa16.21■□□□□ 0.19
XRCC1-206ENST00000597811 AJAP1Q9UKB5 411 aaPredicted RBP16.21■□□□□ 0.19
XRCC1-206ENST00000597811 NUDT5Q9UKK9 219 aa16.21■□□□□ 0.19
XRCC1-206ENST00000597811 SMG5Q9UPR3 1016 aaKnown RBP16.21■□□□□ 0.19
XRCC1-206ENST00000597811 CNTN6Q9UQ52 1028 aa16.21■□□□□ 0.19
XRCC1-206ENST00000597811 MYO18AQ92614 2054 aaKnown RBP16.2■□□□□ 0.18
XRCC1-206ENST00000597811 FAM92AA1XBS5 289 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 LGALS16A8MUM7 142 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 EGFP01133 1207 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 UCHL3P15374 230 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 ZNF18P17022 549 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 ATP5C1P36542 298 aaKnown RBP16.2■□□□□ 0.18
XRCC1-206ENST00000597811 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 PSEN1P49768 467 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 GALK1P51570 392 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 BPIFB4P59827 614 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
XRCC1-206ENST00000597811 AMPD2Q01433 879 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 GOLGA8FQ08AF8 430 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 GOLGA8DPQ0D2H9 430 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 GRSF1Q12849 480 aaKnown RBP eCLIP16.2■□□□□ 0.18
XRCC1-206ENST00000597811 C10orf120Q5SQS8 335 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 BTBD8Q5XKL5 378 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 LUZP1Q86V48 1076 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 DDX42Q86XP3 938 aaKnown RBP eCLIP16.2■□□□□ 0.18
XRCC1-206ENST00000597811 GOLGA1Q92805 767 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 SPAG5Q96R06 1193 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 P2RY13Q9BPV8 354 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 ZSWIM1Q9BR11 485 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 NMUR1Q9HB89 426 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 CBX8Q9HC52 389 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 NLRC4Q9NPP4 1024 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 CACNA1AO00555 2505 aa16.2■□□□□ 0.18
XRCC1-206ENST00000597811 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 SCAMP3O14828 347 aaKnown RBP16.19■□□□□ 0.18
XRCC1-206ENST00000597811 TBX18O95935 607 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 FNTBP49356 437 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 PGFP49763 221 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 TUBP50607 506 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 YWHAGP61981 247 aaKnown RBP eCLIP16.19■□□□□ 0.18
XRCC1-206ENST00000597811 RAB41Q5JT25 222 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 PMF1Q6P1K2 205 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 DENND1BQ6P3S1 775 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 PASD1Q8IV76 773 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 NDRG1Q92597 394 aaKnown RBP16.19■□□□□ 0.18
XRCC1-206ENST00000597811 EZH1Q92800 747 aaPredicted RBP16.19■□□□□ 0.18
XRCC1-206ENST00000597811 STK33Q9BYT3 514 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 MIS12Q9H081 205 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 PLCB1Q9NQ66 1216 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 RASAL2Q9UJF2 1139 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 CEP83Q9Y592 693 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 USP3Q9Y6I4 520 aa16.19■□□□□ 0.18
XRCC1-206ENST00000597811 RNF40O75150 1001 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 NFATC1O95644 943 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 CAVIN2O95810 425 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 ZDHHC11BP0C7U3 371 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 DRD1P21728 446 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 PKDCCQ504Y2 493 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 HEATR6Q6AI08 1181 aaKnown RBP16.18■□□□□ 0.18
XRCC1-206ENST00000597811 CACNA2D4Q7Z3S7 1137 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 SLC47A2Q86VL8 602 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 MIB1Q86YT6 1006 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 KIAA2013Q8IYS2 634 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 RNF139Q8WU17 664 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 SLC35F5Q8WV83 523 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 KCTD13Q8WZ19 329 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 CD101Q93033 1021 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 ZFRQ96KR1 1074 aaKnown RBP16.18■□□□□ 0.18
XRCC1-206ENST00000597811 CDK5RAP1Q96SZ6 601 aaKnown RBP16.18■□□□□ 0.18
XRCC1-206ENST00000597811 HSD3B7Q9H2F3 369 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 OSER1Q9NX31 292 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 DNMT3LQ9UJW3 386 aa16.18■□□□□ 0.18
XRCC1-206ENST00000597811 LRRC10BA6NIK2 292 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 SLC9A3R1O14745 358 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-206ENST00000597811 MDM4O15151 490 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 ACADSBP45954 432 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 NR1H3Q13133 447 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 SRSF5Q13243 272 aaKnown RBP16.17■□□□□ 0.18
XRCC1-206ENST00000597811 IQCB1Q15051 598 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 GAB4Q2WGN9 574 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 SCD5Q86SK9 330 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 FAM71AQ8IYT1 594 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 HSFY1Q96LI6 401 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 GANQ9H2C0 597 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 CYLDQ9NQC7 956 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 CNGB3Q9NQW8 809 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.17■□□□□ 0.18
XRCC1-206ENST00000597811 POLR3BQ9NW08 1133 aaPredicted RBP16.17■□□□□ 0.18
XRCC1-206ENST00000597811 CLIC5Q9NZA1 410 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 NCDNQ9UBB6 729 aa16.17■□□□□ 0.18
XRCC1-206ENST00000597811 LSM7Q9UK45 103 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms