RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 ARHGAP44Q17R89 818 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 LY6G5CQ5SRR4 150 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 BTBD8Q5XKL5 378 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 TSSK4Q6SA08 328 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 Q6ZNB5 142 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 C11orf57Q6ZUT1 292 aaPredicted RBP16.99■□□□□ 0.31
TRIM28-206ENST00000595974 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 IRGQQ8WZA9 623 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 SPHK2Q9NRA0 654 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 MARCH2Q9P0N8 246 aa16.99■□□□□ 0.31
TRIM28-206ENST00000595974 OTOGLQ3ZCN5 2332 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 YJEFN3A6XGL0 299 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 CHURC1-FNTBB4DL54 471 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 E7ENQ6 273 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 THAP12O43422 761 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 FBXO21O94952 628 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 LETM1O95202 739 aaPredicted RBP16.98■□□□□ 0.31
TRIM28-206ENST00000595974 LCP1P13796 627 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 USP8P40818 1118 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 GPD2P43304 727 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 MYL5Q02045 173 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 RNF139Q8WU17 664 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 ZNF606Q8WXB4 792 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 EZH1Q92800 747 aaPredicted RBP16.98■□□□□ 0.31
TRIM28-206ENST00000595974 ACDQ96AP0 544 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 DCLK3Q9C098 648 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 ABCC13Q9NSE7 274 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 DNAJC12Q9UKB3 198 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 ZNF510Q9Y2H8 683 aa16.98■□□□□ 0.31
TRIM28-206ENST00000595974 K7ESF4 209 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
TRIM28-206ENST00000595974 TPM2P07951 284 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 ACADSBP45954 432 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 RPL34P49207 117 aaKnown RBP16.97■□□□□ 0.31
TRIM28-206ENST00000595974 PREPLQ4J6C6 727 aaPredicted RBP16.97■□□□□ 0.31
TRIM28-206ENST00000595974 BSPRYQ5W0U4 402 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 PKN3Q6P5Z2 889 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 C12orf40Q86WS4 652 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 ETFBKMTQ8IXQ9 262 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 STK32AQ8WU08 396 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 ATRIPQ8WXE1 791 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 NDRG1Q92597 394 aaKnown RBP16.97■□□□□ 0.31
TRIM28-206ENST00000595974 PLD4Q96BZ4 506 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 PNKPQ96T60 521 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 TAB2Q9NYJ8 693 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 MARK1Q9P0L2 795 aa16.97■□□□□ 0.31
TRIM28-206ENST00000595974 AJAP1Q9UKB5 411 aaPredicted RBP16.97■□□□□ 0.31
TRIM28-206ENST00000595974 EP300Q09472 2414 aaPredicted RBP16.96■□□□□ 0.31
TRIM28-206ENST00000595974 SLC12A8A0AV02 714 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 LILRB5O75023 590 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 GABBR2O75899 941 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 LTFP02788 710 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 APODP05090 189 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 HOXA6P31267 233 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 KRT31Q15323 416 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 ANO4Q32M45 955 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 DPY19L2P1Q6NXN4 242 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 DENND1BQ6P3S1 775 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 ASCL5Q7RTU5 278 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 TMEM25Q86YD3 366 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 RPLP0P6Q8NHW5 317 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 GOLGA1Q92805 767 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 ARHGEF4Q9NR80 690 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 ST7Q9NRC1 585 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 FANCLQ9NW38 375 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 HBS1LQ9Y450 684 aaKnown RBP16.96■□□□□ 0.31
TRIM28-206ENST00000595974 EML5Q05BV3 1969 aa16.96■□□□□ 0.31
TRIM28-206ENST00000595974 GVINP1Q7Z2Y8 2422 aa16.96■□□□□ 0.3
TRIM28-206ENST00000595974 GPR179Q6PRD1 2367 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 KAT7O95251 611 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 LMNAP02545 664 aaKnown RBP16.95■□□□□ 0.3
TRIM28-206ENST00000595974 CORO1AP31146 461 aaKnown RBP16.95■□□□□ 0.3
TRIM28-206ENST00000595974 GRIA2P42262 883 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 PTK2Q05397 1052 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 TYRO3Q06418 890 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 KCNMA1Q12791 1236 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 KLHDC7AQ5VTJ3 777 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 ANKRD20A12PQ8NF67 263 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 CLEC4CQ8WTT0 213 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 EDEM1Q92611 657 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 LSM14BQ9BX40 385 aaKnown RBP16.95■□□□□ 0.3
TRIM28-206ENST00000595974 BBS2Q9BXC9 721 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 SLC4A5Q9BY07 1137 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 ACP6Q9NPH0 428 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 C2orf42Q9NWW7 574 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 WDR35Q9P2L0 1181 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 PCDHGC3Q9UN70 934 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 FHOD1Q9Y613 1164 aa16.95■□□□□ 0.3
TRIM28-206ENST00000595974 NEDD8-MDP1E9PL57 170 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 K7EQS6 105 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 FOXN3O00409 490 aaPredicted RBP16.94■□□□□ 0.3
TRIM28-206ENST00000595974 PIK3R2O00459 728 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 CACNG3O60359 315 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 TULP3O75386 442 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 KLKB1P03952 638 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 HMBSP08397 361 aa16.94■□□□□ 0.3
TRIM28-206ENST00000595974 UCHL3P15374 230 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms