RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 CISD3P0C7P0 127 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 YWHAQP27348 245 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 GRK6P43250 576 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 PGFP49763 221 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 MAPRE1Q15691 268 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 KCNT1Q5JUK3 1230 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 HECTD3Q5T447 861 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 METTL3Q86U44 580 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 FAM124AQ86V42 546 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 TMPRSS12Q86WS5 348 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 BRSK2Q8IWQ3 736 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 NOC3LQ8WTT2 800 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 SNX19Q92543 992 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 FBXO32Q969P5 355 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 NXPE2Q96DL1 559 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 P2RY11Q96G91 374 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 HPDLQ96IR7 371 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 EPSTI1Q96J88 318 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 MRPL45Q9BRJ2 306 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 ZNF518BQ9C0D4 1074 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 BLOC1S4Q9NUP1 217 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 RBAKQ9NYW8 714 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 UNC79Q9P2D8 2635 aa14.57□□□□□ -0.08
SHKBP1-208ENST00000595726 E9PAM4 449 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 H0Y8X5 98 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 CACNG3O60359 315 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 TBCAO75347 108 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 NASPP49321 788 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 CXADRP78310 365 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 TARDBPQ13148 414 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 POSTNQ15063 836 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 DPH6Q7L8W6 267 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 ZNF720Q7Z2F6 126 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 TMPRSS6Q8IU80 811 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 OR5B17Q8NGF7 314 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 RAD54LQ92698 747 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 XPO6Q96QU8 1125 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 KCNK16Q96T55 309 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 MMS19Q96T76 1030 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 DPEP3Q9H4B8 488 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 CLMPQ9H6B4 373 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 PLK2Q9NYY3 685 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 ANKRD6Q9Y2G4 727 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 PTPRJQ12913 1337 aa14.56□□□□□ -0.08
SHKBP1-208ENST00000595726 BOD1L1Q8NFC6 3051 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 TEX51A0A1B0GUA7 166 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 GFRA2O00451 464 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 GREM1O60565 184 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 TBX18O95935 607 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 WARSP23381 471 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 GNL1P36915 607 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 DGKGP49619 791 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 AFF3P51826 1226 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 CCDC173Q0VFZ6 552 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 SLC39A14Q15043 492 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 PRAMEF14Q5SWL7 426 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 C6orf118Q5T5N4 469 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 NUP93Q8N1F7 819 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 LARP4BQ92615 738 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 SIPA1Q96FS4 1042 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 ARID3AQ99856 593 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 NUP58Q9BVL2 599 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 B3GNT5Q9BYG0 378 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 SEMA4CQ9C0C4 833 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 ST6GALNAC4Q9H4F1 302 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 PCIF1Q9H4Z3 704 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 C6orf106Q9H6K1 298 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 FTSJ1Q9UET6 329 aa14.55□□□□□ -0.08
SHKBP1-208ENST00000595726 TEX15Q9BXT5 2789 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 TMEM191BP0C7N4 346 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 KRT10P13645 584 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 PTPN1P18031 435 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 IL12RB1P42701 662 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 TLE3Q04726 772 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 DNAJC3Q13217 504 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 STARD3Q14849 445 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 TAF1BQ53T94 588 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 HTR3DQ70Z44 454 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 SFR1Q86XK3 245 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 GATAD2AQ86YP4 633 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 FMNL3Q8IVF7 1028 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 FAM181AQ8N9Y4 354 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 LINC00301Q8NCQ3 95 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 NACA2Q9H009 215 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 SNX25Q9H3E2 840 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 TM9SF3Q9HD45 589 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 TBC1D7Q9P0N9 293 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 WDR35Q9P2L0 1181 aa14.54□□□□□ -0.08
SHKBP1-208ENST00000595726 PCDHGA12O60330 932 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PPP1R37O75864 691 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 F13A1P00488 732 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 ZSCAN22P10073 491 aaPredicted RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 OXTRP30559 389 aa14.53□□□□□ -0.08
SHKBP1-208ENST00000595726 ABCD1P33897 745 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms