RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 LRRC32Q14392 662 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 KLHL40Q2TBA0 621 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 DGKKQ5KSL6 1271 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 LY6G5CQ5SRR4 150 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 KLHDC7AQ5VTJ3 777 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 TSSK4Q6SA08 328 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 MAMSTRQ6ZN01 415 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SFTPA1Q8IWL2 248 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 DHX40Q8IX18 779 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 FAM71AQ8IYT1 594 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SIX6OS1Q8N1H7 587 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 ARHGAP18Q8N392 663 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 WDTC1Q8N5D0 677 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 EDEM1Q92611 657 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 OTUB2Q96DC9 234 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 HSFY1Q96LI6 401 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 P2RY13Q9BPV8 354 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 IER2Q9BTL4 223 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 LSM14BQ9BX40 385 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 GANQ9H2C0 597 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 TBC1D14Q9P2M4 693 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 LIMA1Q9UHB6 759 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 RASAL2Q9UJF2 1139 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SH3BP1Q9Y3L3 701 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 SDK1Q7Z5N4 2213 aa11.52□□□□□ -0.57
SHKBP1-206ENST00000595523 EPHB6O15197 1021 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 FYNP06241 537 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 RALAP11233 206 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 ADH5P11766 374 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 ATP1A3P13637 1013 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC6A11P48066 632 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SATB1Q01826 763 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 NR1H3Q13133 447 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 DRAP1Q14919 205 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 BSPRYQ5W0U4 402 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SMYD5Q6GMV2 418 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC47A2Q86VL8 602 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 TMEM25Q86YD3 366 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 ETFBKMTQ8IXQ9 262 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 PHTF2Q8N3S3 785 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SPEM1Q8N4L4 309 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 IRGQQ8WZA9 623 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 NELL1Q92832 810 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 CD101Q93033 1021 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 CDK5RAP1Q96SZ6 601 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 BPIFA3Q9BQP9 254 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 IRF2BPLQ9H1B7 796 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 PLCB1Q9NQ66 1216 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SPHK2Q9NRA0 654 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 PCDHGC3Q9UN70 934 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 SIK3Q9Y2K2 1263 aa11.51□□□□□ -0.57
SHKBP1-206ENST00000595523 LRRC10BA6NIK2 292 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 LGALS16A8MUM7 142 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 E5RJQ4 531 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PROB1E7EW31 1015 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 F8VZ95 297 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 K7ESF4 209 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 HOXC11O43248 304 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 MED7O43513 233 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 RNF40O75150 1001 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 ADH1CP00326 375 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 LTFP02788 710 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 HMBSP08397 361 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 DRD1P21728 446 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 AMPD2Q01433 879 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PDCLQ13371 301 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 RAPGEF1Q13905 1077 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 BTBD8Q5XKL5 378 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 MSANTD2Q6P1R3 559 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 RSRC2Q7L4I2 434 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PASD1Q8IV76 773 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 SCUBE3Q8IX30 993 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 SYNPOQ8N3V7 929 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 STK32AQ8WU08 396 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PIWIL1Q96J94 861 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 CPXM1Q96SM3 734 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 MIS12Q9H081 205 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 ABCC13Q9NSE7 274 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 POLR3BQ9NW08 1133 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 SFMBT1Q9UHJ3 866 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 R4GN57 208 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 RALGAPA1Q6GYQ0 2036 aa11.5□□□□□ -0.57
SHKBP1-206ENST00000595523 PLXND1Q9Y4D7 1925 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 SLC12A8A0AV02 714 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 SYCE3A1L190 88 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 K7EQS6 105 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 TRIM24O15164 1050 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 MSI1O43347 362 aaKnown RBP11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 FBXO21O94952 628 aa11.49□□□□□ -0.57
SHKBP1-206ENST00000595523 PAPSS2O95340 614 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms