RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 EMC10Q5UCC4 262 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 BSPRYQ5W0U4 402 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 RBM43Q6ZSC3 357 aaKnown RBP15.47■□□□□ 0.07
USE1-205ENST00000594724 TPGS1Q6ZTW0 290 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 ENOSF1Q7L5Y1 443 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 EDEM1Q92611 657 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 TUBGCP2Q9BSJ2 902 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 ARHGEF4Q9NR80 690 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 MARCH2Q9P0N8 246 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 APEX2Q9UBZ4 518 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 AJAP1Q9UKB5 411 aaPredicted RBP15.47■□□□□ 0.07
USE1-205ENST00000594724 SLC8A2Q9UPR5 921 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 ATG2BQ96BY7 2078 aa15.47■□□□□ 0.07
USE1-205ENST00000594724 FANCMQ8IYD8 2048 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 PIEZO1Q92508 2521 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 SLC12A8A0AV02 714 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 GTPBP10A4D1E9 387 aaKnown RBP15.46■□□□□ 0.07
USE1-205ENST00000594724 BECN2A8MW95 431 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 KCNJ18B7U540 433 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 TRIM24O15164 1050 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 HRO43593 1189 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 KAT7O95251 611 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 APODP05090 189 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 EIF2DP41214 584 aaKnown RBP15.46■□□□□ 0.07
USE1-205ENST00000594724 DAOAP59103 153 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 KCNJ12Q14500 433 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 DENND1BQ6P3S1 775 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 Q6ZNB5 142 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 LONP2Q86WA8 852 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 DCLK2Q8N568 766 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 USP33Q8TEY7 942 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 ZNF606Q8WXB4 792 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 MIS12Q9H081 205 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 SIX2Q9NPC8 291 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 STRIP2Q9ULQ0 834 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 MYOFQ9NZM1 2061 aa15.46■□□□□ 0.07
USE1-205ENST00000594724 NEDD8-MDP1E9PL57 170 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 PES1O00541 588 aaKnown RBP15.45■□□□□ 0.06
USE1-205ENST00000594724 HOXC11O43248 304 aaPredicted RBP15.45■□□□□ 0.06
USE1-205ENST00000594724 THAP12O43422 761 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 TULP3O75386 442 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 GNA15P30679 374 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 CORO1AP31146 461 aaKnown RBP15.45■□□□□ 0.06
USE1-205ENST00000594724 GPD2P43304 727 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 LPAL2Q16609 132 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 TCP11X2Q5H9J9 407 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 CT47A1Q5JQC4 288 aaPredicted RBP15.45■□□□□ 0.06
USE1-205ENST00000594724 DENND1CQ8IV53 801 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 FMNL3Q8IVF7 1028 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 ETFBKMTQ8IXQ9 262 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 SCML4Q8N228 414 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 PHTF2Q8N3S3 785 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 CCDC33Q8N5R6 958 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
USE1-205ENST00000594724 RNF139Q8WU17 664 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 BHMTQ93088 406 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 HHIPQ96QV1 700 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 BBS2Q9BXC9 721 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 EPC1Q9H2F5 836 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 ZDHHC4Q9NPG8 344 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 ST7Q9NRC1 585 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 ABCC13Q9NSE7 274 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 PLK2Q9NYY3 685 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 DEC1Q9P2X7 70 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 SFMBT1Q9UHJ3 866 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 DNAJC12Q9UKB3 198 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 NFE2L3Q9Y4A8 694 aa15.45■□□□□ 0.06
USE1-205ENST00000594724 A0A0A0MRY4 1105 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 TBC1D3BA6NDS4 549 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 MED7O43513 233 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 TYRP14679 529 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 HOXA6P31267 233 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 TIE1P35590 1138 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 GRIA2P42262 883 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 DMC1Q14565 340 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 DPY19L2P1Q6NXN4 242 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 SASS6Q6UVJ0 657 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 SYT13Q7L8C5 426 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 WDR5BQ86VZ2 330 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 SCUBE3Q8IX30 993 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 SHC3Q92529 594 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 P2RY11Q96G91 374 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 HINFPQ9BQA5 517 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 DCLK3Q9C098 648 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 OLA1Q9NTK5 396 aaKnown RBP15.44■□□□□ 0.06
USE1-205ENST00000594724 TAB2Q9NYJ8 693 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 WDR35Q9P2L0 1181 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 CYTH4Q9UIA0 394 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 AGO1Q9UL18 857 aaKnown RBP15.44■□□□□ 0.06
USE1-205ENST00000594724 SMG5Q9UPR3 1016 aaKnown RBP15.44■□□□□ 0.06
USE1-205ENST00000594724 ZNF510Q9Y2H8 683 aa15.44■□□□□ 0.06
USE1-205ENST00000594724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.43■□□□□ 0.06
USE1-205ENST00000594724 FOXN3O00409 490 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms