RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 UPK3BL1B0FP48 263 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 UPK3BL2E5RIL1 263 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 SGK1O00141 431 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 CYP17A1P05093 508 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 CFIP05156 583 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 KRT19P08727 400 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 P4HA1P13674 534 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 TCF3P15923 654 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ITPKAP23677 461 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ZXDBP98169 803 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 SYCP1Q15431 976 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 SGSM1Q2NKQ1 1148 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 C19orf48Q6RUI8 117 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 PDCL2Q8N4E4 241 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 IL17RCQ8NAC3 791 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 TXNDC5Q8NBS9 432 aaKnown RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 EHBP1Q8NDI1 1231 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 TAF4BQ92750 862 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ZNF560Q96MR9 790 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 PKMYT1Q99640 499 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 GTPBP2Q9BX10 602 aaKnown RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ZDHHC4Q9NPG8 344 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 BCCIPQ9P287 314 aaKnown RBP eCLIP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 PILRBQ9UKJ0 227 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 L1RE1Q9UN81 338 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
FOXA3-202ENST00000594297 SMG1Q96Q15 3661 aaKnown RBP16.29■□□□□ 0.2
FOXA3-202ENST00000594297 ITIH6Q6UXX5 1313 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 FAM221BA6H8Z2 402 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 H0Y626 953 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 TEX33O43247 280 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 MAP3K13O43283 966 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 TRIM16O95361 564 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 KLF8O95600 359 aaPredicted RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 C4BPAP04003 597 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 ATICP31939 592 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 PNPLA4P41247 253 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 MRPS21P82921 87 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 NCOA4Q13772 614 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 TSR1Q2NL82 804 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 MAP7D1Q3KQU3 841 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 SOWAHCQ53LP3 525 aaPredicted RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 C1orf220Q5T0J3 134 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 LMBRD2Q68DH5 695 aaPredicted RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 RAB44Q7Z6P3 723 aaPredicted RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 FMNL3Q8IVF7 1028 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 HDDC3Q8N4P3 179 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 OR2I1PQ8NGU4 316 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 HMGB4Q8WW32 186 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 COQ4Q9Y3A0 265 aa16.28■□□□□ 0.2
FOXA3-202ENST00000594297 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
FOXA3-202ENST00000594297 PI4KAP42356 2102 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 HCRTO43612 131 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 HLA-DRAP01903 254 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 TIE1P35590 1138 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 ATXN3P54252 364 aaPredicted RBP16.27■□□□□ 0.2
FOXA3-202ENST00000594297 TDRD10Q5VZ19 366 aaKnown RBP16.27■□□□□ 0.2
FOXA3-202ENST00000594297 TMC6Q7Z403 805 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 PDZD3Q86UT5 571 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 OSTM1Q86WC4 334 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 C12orf40Q86WS4 652 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 VSTM4Q8IW00 320 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 OR5B17Q8NGF7 314 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 ZNF516Q92618 1163 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 DNAI2Q9GZS0 605 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 INTS2Q9H0H0 1204 aaKnown RBP16.27■□□□□ 0.2
FOXA3-202ENST00000594297 POLMQ9NP87 494 aaPredicted RBP16.27■□□□□ 0.2
FOXA3-202ENST00000594297 PLCB1Q9NQ66 1216 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 GTF3C4Q9UKN8 822 aa16.27■□□□□ 0.2
FOXA3-202ENST00000594297 TCRBV21S2A2A0A5A6 115 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 PCNX2A6NKB5 2137 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 LEFTY2O00292 366 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
FOXA3-202ENST00000594297 AP5Z1O43299 807 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 ADAM23O75077 832 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 ITGB3P05106 788 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 HDCP19113 662 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 POLR2BP30876 1174 aaKnown RBP16.26■□□□□ 0.19
FOXA3-202ENST00000594297 HOXD12P35452 270 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 DPP6P42658 865 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 SLC6A11P48066 632 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 WNT7BP56706 349 aa16.26■□□□□ 0.19
FOXA3-202ENST00000594297 KDSRQ06136 332 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms