RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MBL2P11226 248 aaPredicted RBP20.55■□□□□ 0.88
LSM4-203ENST00000593829 RALAP11233 206 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 RARGP13631 454 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 RPL34P49207 117 aaKnown RBP20.55■□□□□ 0.88
LSM4-203ENST00000593829 PFKPQ01813 784 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 LONRF2Q1L5Z9 754 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 NOP9Q86U38 636 aaKnown RBP20.55■□□□□ 0.88
LSM4-203ENST00000593829 PASD1Q8IV76 773 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 EPS8L1Q8TE68 723 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 SLC4A5Q9BY07 1137 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.55■□□□□ 0.88
LSM4-203ENST00000593829 CDC23Q9UJX2 597 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 FBXL21Q9UKT6 434 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 CEP83Q9Y592 693 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 CPQQ9Y646 472 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 ITIH6Q6UXX5 1313 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 PIK3R2O00459 728 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 YWHAGP61981 247 aaKnown RBP eCLIP20.55■□□□□ 0.88
LSM4-203ENST00000593829 TADA2BQ86TJ2 420 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 ZNF677Q86XU0 584 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 ZNF276Q8N554 614 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 SH3RF2Q8TEC5 729 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 DDX1Q92499 740 aaKnown RBP20.55■□□□□ 0.88
LSM4-203ENST00000593829 IRF7Q92985 503 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 NOX5Q96PH1 765 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 CDK5RAP1Q96SZ6 601 aaKnown RBP20.55■□□□□ 0.88
LSM4-203ENST00000593829 WNT16Q9UBV4 365 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 CYTH4Q9UIA0 394 aa20.55■□□□□ 0.88
LSM4-203ENST00000593829 CHADO15335 359 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 TCF3P15923 654 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 ATP5C1P36542 298 aaKnown RBP20.54■□□□□ 0.88
LSM4-203ENST00000593829 DAOAP59103 153 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 PDCLQ13371 301 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 WDTC1Q8N5D0 677 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 TTC16Q8NEE8 873 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 IRGQQ8WZA9 623 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 NDRG1Q92597 394 aaKnown RBP20.54■□□□□ 0.88
LSM4-203ENST00000593829 SMPD4Q9NXE4 827 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 MYO6Q9UM54 1294 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 TRIOO75962 3097 aa20.54■□□□□ 0.88
LSM4-203ENST00000593829 TBX18O95935 607 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 USP4Q13107 963 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 ZNF77Q15935 545 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 KLHDC10Q6PID8 442 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 BHLHA9Q7RTU4 235 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 TMEM110Q86TL2 294 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
LSM4-203ENST00000593829 FMNL3Q8IVF7 1028 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 TMEM35BQ8NCS4 154 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 NUP58Q9BVL2 599 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 EDEM3Q9BZQ6 932 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 NOCTQ9UK39 431 aaKnown RBP20.53■□□□□ 0.88
LSM4-203ENST00000593829 LEFTY2O00292 366 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 KIF5CO60282 957 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 CCDC172P0C7W6 258 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 ZXDBP98169 803 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 ARID5AQ03989 594 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 FIGNQ5HY92 759 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 C10orf120Q5SQS8 335 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 BTBD8Q5XKL5 378 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 SCUBE3Q8IX30 993 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 C1orf131Q8NDD1 294 aaKnown RBP20.53■□□□□ 0.88
LSM4-203ENST00000593829 RIN3Q8TB24 985 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 BAP1Q92560 729 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 DNASE1L2Q92874 299 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 MIS12Q9H081 205 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 EPC1Q9H2F5 836 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 DNMT3LQ9UJW3 386 aa20.53■□□□□ 0.88
LSM4-203ENST00000593829 TMEM221A6NGB7 291 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 YJEFN3A6XGL0 299 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 E5RJQ4 531 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 E7ENQ6 273 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 M0R296 226 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 SART1O43290 800 aaKnown RBP20.52■□□□□ 0.88
LSM4-203ENST00000593829 SNX16P57768 344 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 CDR2Q01850 454 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 MTF1Q14872 753 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 BSPRYQ5W0U4 402 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 ASIC4Q96FT7 647 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 ZFYVE19Q96K21 471 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 C1QTNF1Q9BXJ1 281 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 TRPV5Q9NQA5 729 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 MYO1AQ9UBC5 1043 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 NUDT5Q9UKK9 219 aa20.52■□□□□ 0.88
LSM4-203ENST00000593829 MMEP08473 750 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 FERP16591 822 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 CDH5P33151 784 aaPredicted RBP20.51■□□□□ 0.87
LSM4-203ENST00000593829 CLEC4CQ8WTT0 213 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 SLC20A1Q8WUM9 679 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 CPXM1Q96SM3 734 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 TTYH3Q9C0H2 523 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 GKN1Q9NS71 199 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 ABCC13Q9NSE7 274 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 CA14Q9ULX7 337 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 ARNTLO00327 626 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 MFAP3LO75121 409 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 ERLIN1O75477 346 aa20.51■□□□□ 0.87
LSM4-203ENST00000593829 LSM8O95777 96 aaKnown RBP20.51■□□□□ 0.87
LSM4-203ENST00000593829 BEND6Q5SZJ8 279 aaPredicted RBP20.51■□□□□ 0.87
LSM4-203ENST00000593829 RAD9BQ6WBX8 426 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms