RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 A0A1W2PQH9 124 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 PDXKO00764 312 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 ACO1P21399 889 aaKnown RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 HOXD12P35452 270 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 ZNF33AQ06730 810 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 INCA1Q0VD86 236 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 SEMA3BQ13214 749 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 DUOXA1Q1HG43 343 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 SLC36A4Q6YBV0 504 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 CHPFQ8IZ52 775 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 KDF1Q8NAX2 398 aaPredicted RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 GATA6Q92908 595 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 XPO6Q96QU8 1125 aaKnown RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 HNRNPABQ99729 332 aaKnown RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 GABRG3Q99928 467 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 GTPBP2Q9BX10 602 aaKnown RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 SLC6A17Q9H1V8 727 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 APOBEC3GQ9HC16 384 aaKnown RBP17.25■□□□□ 0.35
LIG1-205ENST00000593425 CAPN10Q9HC96 672 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 SLC6A14Q9UN76 642 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 CYP8B1Q9UNU6 501 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 SCML2Q9UQR0 700 aa17.25■□□□□ 0.35
LIG1-205ENST00000593425 SPAARA0A1B0GVQ0 90 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 RARGP13631 454 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
LIG1-205ENST00000593425 Q6ZNB5 142 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 PIP4P1Q86T03 277 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 OR2I1PQ8NGU4 316 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 BHMTQ93088 406 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 SNX21Q969T3 373 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 CYFIP2Q96F07 1278 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 SLC32A1Q9H598 525 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIG1-205ENST00000593425 CACNA2D2Q9NY47 1150 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 PLK2Q9NYY3 685 aa17.24■□□□□ 0.35
LIG1-205ENST00000593425 IKBKBO14920 756 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 HYAL3O43820 417 aaPredicted RBP17.23■□□□□ 0.35
LIG1-205ENST00000593425 SERPINF2P08697 491 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 CISD3P0C7P0 127 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 TRIM49P0CI25 452 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 TRIM49CP0CI26 452 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 DGKGP49619 791 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 ATXN3P54252 364 aaPredicted RBP17.23■□□□□ 0.35
LIG1-205ENST00000593425 GOLGA8FQ08AF8 430 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 GOLGA8DPQ0D2H9 430 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 CEP76Q8TAP6 659 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 HSPA12BQ96MM6 686 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 WDR35Q9P2L0 1181 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 RCOR1Q9UKL0 485 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 PCDHA5Q9Y5H7 936 aa17.23■□□□□ 0.35
LIG1-205ENST00000593425 A0A1B0GVL5 298 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 UPK3BL1B0FP48 263 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 WASH3PC4AMC7 463 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 UPK3BL2E5RIL1 263 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 ZNF217O75362 1048 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 STC2O76061 302 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 PDIA4P13667 645 aaKnown RBP17.22■□□□□ 0.35
LIG1-205ENST00000593425 PFKFB1P16118 471 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 CD58P19256 250 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 GCLMP48507 274 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 VAMP7P51809 220 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 FAM193AP78312 1265 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 GFPT1Q06210 699 aaPredicted RBP17.22■□□□□ 0.35
LIG1-205ENST00000593425 ATL3Q6DD88 541 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 SDE2Q6IQ49 451 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 KLHDC10Q6PID8 442 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 SCD5Q86SK9 330 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 HDDC3Q8N4P3 179 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 MINDY1Q8N5J2 469 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 TRIML1Q8N9V2 468 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 TAS1R2Q8TE23 839 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 MRGPRX1Q96LB2 322 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 PNPLA8Q9NP80 782 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 DNMT3LQ9UJW3 386 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 NAGPAQ9UK23 515 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 TRAF3IP3Q9Y228 551 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
LIG1-205ENST00000593425 CALUO43852 315 aaPredicted RBP17.21■□□□□ 0.35
LIG1-205ENST00000593425 CILPO75339 1184 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 KLKB1P03952 638 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 PRR29P0C7W0 189 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 PLA2G4AP47712 749 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 KIF11P52732 1056 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 SIM1P81133 766 aaPredicted RBP17.21■□□□□ 0.35
LIG1-205ENST00000593425 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 C10orf120Q5SQS8 335 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 PPP1R26Q5T8A7 1209 aaPredicted RBP17.21■□□□□ 0.35
LIG1-205ENST00000593425 CCDC186Q7Z3E2 898 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 CYP3A43Q9HB55 503 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 FBXO10Q9UK96 956 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 KLK13Q9UKR3 277 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
LIG1-205ENST00000593425 GON4LQ3T8J9 2241 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 ASPMQ8IZT6 3477 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 TMEM8BA6NDV4 472 aa17.2■□□□□ 0.34
LIG1-205ENST00000593425 ARHGAP33O14559 1287 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms