RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 GRASPQ7Z6J2 395 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-219ENST00000592927 TTC30AQ86WT1 665 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 NUP93Q8N1F7 819 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 TRIM58Q8NG06 486 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 VCPIP1Q96JH7 1222 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 NOX5Q96PH1 765 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 PCDHB18PQ96TA0 734 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 TMEM30AQ9NV96 361 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 ZSCAN32Q9NX65 697 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
DDX39A-219ENST00000592927 CEP83Q9Y592 693 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 PAXBP1Q9Y5B6 917 aa12.49□□□□□ -0.41
DDX39A-219ENST00000592927 NCANO14594 1321 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 A0A0U1RQJ8 604 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 RTN3O95197 1032 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 FTLP02792 175 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 MYBL1P10243 752 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 UNGP13051 313 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 CDH5P33151 784 aaPredicted RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 GPC5P78333 572 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 CENPCQ03188 943 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 PDE4CQ08493 712 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 PABPC1LQ4VXU2 614 aaKnown RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 ZNF569Q5MCW4 686 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 CYP4A22Q5TCH4 519 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 DENND1BQ6P3S1 775 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 RHOT2Q8IXI1 618 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 LEMD2Q8NC56 503 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 ZMIZ2Q8NF64 920 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 ALS2CR12Q96Q35 445 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 PACSIN1Q9BY11 444 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 UBXN6Q9BZV1 441 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 LHX5Q9H2C1 402 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 PNPLA8Q9NP80 782 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 HCFC1R1Q9NWW0 138 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 DNMT3BQ9UBC3 853 aaKnown RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 SETXQ7Z333 2677 aaKnown RBP12.48□□□□□ -0.41
DDX39A-219ENST00000592927 SPEGQ15772 3267 aa12.48□□□□□ -0.41
DDX39A-219ENST00000592927 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 C1QTNF9BB2RNN3 333 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 FGF19O95750 216 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 RHOP08100 348 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 C1QTNF9P0C862 333 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 MYL4P12829 197 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 CASQ1P31415 396 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 NSFP46459 744 aaKnown RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 SLC5A3P53794 718 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 HADHBP55084 474 aaKnown RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 STARD6P59095 220 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 NOMO3P69849 1222 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 NTHL1P78549 312 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 IFRD2Q12894 506 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 PKDCCQ504Y2 493 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 TSSK4Q6SA08 328 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 PDZD4Q76G19 769 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 PIGZQ86VD9 579 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 TMEM35BQ8NCS4 154 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 STKLD1Q8NE28 680 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 RFFLQ8WZ73 363 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 GCNAQ96QF7 691 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 LRRC4Q9HBW1 653 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 WDR6Q9NNW5 1121 aaKnown RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 COMMD8Q9NX08 183 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-219ENST00000592927 TRIM10Q9UDY6 481 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 DNAI1Q9UI46 699 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 DUSP10Q9Y6W6 482 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 FANCMQ8IYD8 2048 aa12.47□□□□□ -0.41
DDX39A-219ENST00000592927 FRYQ5TBA9 3013 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 MACROD2A1Z1Q3 448 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 HHLA1C9JL84 531 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 TULP2O00295 520 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 ZNF197O14709 1029 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 GDF9O60383 454 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 ZIC2O95409 532 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-219ENST00000592927 ABL1P00519 1130 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 HMGA1P17096 107 aaKnown RBP12.46□□□□□ -0.41
DDX39A-219ENST00000592927 FSHRP23945 695 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 YWHAQP27348 245 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 GPD2P43304 727 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 PLA2G4AP47712 749 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 EPHA5P54756 1037 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 USP46P62068 366 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
DDX39A-219ENST00000592927 TUBB2AQ13885 445 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 LPAL2Q16609 132 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-219ENST00000592927 TMC8Q8IU68 726 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 SLC35F6Q8N357 371 aa12.46□□□□□ -0.41
DDX39A-219ENST00000592927 MSANTD4Q8NCY6 345 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms