RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 MSI1O43347 362 aaKnown RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 MED7O43513 233 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 STC2O76061 302 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 CHRNB1P11230 501 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 CYP11B1P15538 503 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 CHRNB2P17787 502 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 PSEN1P49768 467 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 GALK1P51570 392 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 PITX1P78337 314 aaPredicted RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 PDCLQ13371 301 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 DHCR24Q15392 516 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 C2CD6Q53TS8 623 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 LY6G5CQ5SRR4 150 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 BTBD8Q5XKL5 378 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 FSTL4Q6MZW2 842 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 KLHDC10Q6PID8 442 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 Q6ZS52 159 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 RSRC2Q7L4I2 434 aaKnown RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 C12orf40Q86WS4 652 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 RALGPS2Q86X27 583 aaPredicted RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 TMEM25Q86YD3 366 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 CLDN23Q96B33 292 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 NOCTQ9UK39 431 aaKnown RBP12.07□□□□□ -0.48
VMP1-211ENST00000591315 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
VMP1-211ENST00000591315 ZFHX2Q9C0A1 2572 aaPredicted RBP12.06□□□□□ -0.48
VMP1-211ENST00000591315 A0A1B0GTH6 734 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 H0Y858 1186 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 MAN2B1O00754 1011 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 TRIM24O15164 1050 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
VMP1-211ENST00000591315 EGFP01133 1207 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ERBB2P04626 1255 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 MMEP08473 750 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 KRT9P35527 623 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 SOX5P35711 763 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 OPRD1P41143 372 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 FANCCQ00597 558 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ARID5AQ03989 594 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 SYPL2Q5VXT5 272 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 PKN3Q6P5Z2 889 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 Q6ZNB5 142 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 TMEM110Q86TL2 294 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 FMNL3Q8IVF7 1028 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 SCML4Q8N228 414 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ARHGAP18Q8N392 663 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 CPA6Q8N4T0 437 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ZNF276Q8N554 614 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 NEK11Q8NG66 645 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ADAM32Q8TC27 787 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 EPS8L1Q8TE68 723 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 STK32AQ8WU08 396 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 ATP2A3Q93084 1043 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 PPP1R13BQ96KQ4 1090 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 FAM86C1Q9NVL1 165 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 NAALADL1Q9UQQ1 740 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 HCN4Q9Y3Q4 1203 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 GPR179Q6PRD1 2367 aa12.06□□□□□ -0.48
VMP1-211ENST00000591315 SDK1Q7Z5N4 2213 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 TRDMT1O14717 391 aaKnown RBP12.05□□□□□ -0.48
VMP1-211ENST00000591315 GRAP2O75791 330 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 NFATC1O95644 943 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 LTFP02788 710 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 CORO1AP31146 461 aaKnown RBP12.05□□□□□ -0.48
VMP1-211ENST00000591315 MLLT6P55198 1093 aaPredicted RBP12.05□□□□□ -0.48
VMP1-211ENST00000591315 MTAPQ13126 283 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 NR1I3Q14994 352 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 FAM183BPQ6ZVS7 135 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 HTR3DQ70Z44 454 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 PHLDB2Q86SQ0 1253 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 DDX42Q86XP3 938 aaKnown RBP eCLIP12.05□□□□□ -0.48
VMP1-211ENST00000591315 DENND1CQ8IV53 801 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 MAML2Q8IZL2 1156 aaPredicted RBP12.05□□□□□ -0.48
VMP1-211ENST00000591315 NAT16Q8N8M0 369 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 IRGQQ8WZA9 623 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 BHMTQ93088 406 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 FAM149B1Q96BN6 582 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 PCDHB18PQ96TA0 734 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 PHOX2BQ99453 314 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 OSBPL6Q9BZF3 934 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 LHX5Q9H2C1 402 aa12.05□□□□□ -0.48
VMP1-211ENST00000591315 MRPS17Q9Y2R5 130 aaKnown RBP12.05□□□□□ -0.48
VMP1-211ENST00000591315 RIF1Q5UIP0 2472 aaKnown RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 SLC9A3R1O14745 358 aaPredicted RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 FBXO21O94952 628 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 SERPINC1P01008 464 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 STAT1P42224 750 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 ACADSBP45954 432 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 BPIFB4P59827 614 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 FMO1Q01740 532 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 CCINQ13939 588 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 MEA1Q16626 185 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 TMEM196Q5HYL7 178 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 E4F1Q66K89 784 aaPredicted RBP12.04□□□□□ -0.48
VMP1-211ENST00000591315 OR6B2Q6IFH4 312 aa12.04□□□□□ -0.48
VMP1-211ENST00000591315 MSANTD2Q6P1R3 559 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms