RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SLC9A1P19634 815 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 MRPS21P82921 87 aaKnown RBP18.92■□□□□ 0.62
VAT1-208ENST00000590924 KCNMA1Q12791 1236 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 SF3A2Q15428 464 aaKnown RBP18.92■□□□□ 0.62
VAT1-208ENST00000590924 ELF2Q15723 593 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 AASDHQ4L235 1098 aaPredicted RBP18.92■□□□□ 0.62
VAT1-208ENST00000590924 HECTD3Q5T447 861 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 CRYBG2Q8N1P7 616 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 TSTD1Q8NFU3 115 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 SCAMP5Q8TAC9 235 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 OTUB2Q96DC9 234 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 ERGIC2Q96RQ1 377 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 PLCB1Q9NQ66 1216 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 MMP17Q9ULZ9 603 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 DAAM1Q9Y4D1 1078 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 ACACBO00763 2458 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 GON4LQ3T8J9 2241 aa18.92■□□□□ 0.62
VAT1-208ENST00000590924 LAMA1P25391 3075 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 A0A1B0GTH6 734 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 SCAMP3O14828 347 aaKnown RBP18.91■□□□□ 0.62
VAT1-208ENST00000590924 AP1G2O75843 785 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 SERPINC1P01008 464 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 ZDHHC11BP0C7U3 371 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 MPLP40238 635 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 NDST1P52848 882 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 SEC13P55735 322 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 FANCCQ00597 558 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 UBXN1Q04323 297 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 CCDC6Q16204 474 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 C2orf27AQ580R0 203 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 RHBDF2Q6PJF5 856 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 RASSF3Q86WH2 238 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 PPM1KQ8N3J5 372 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 ZMIZ2Q8NF64 920 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
VAT1-208ENST00000590924 PNKPQ96T60 521 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 CSNK1G1Q9HCP0 422 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.622e-6■■■■□ 24.9
VAT1-208ENST00000590924 CISHQ9NSE2 258 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 APEX2Q9UBZ4 518 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 CHORDC1Q9UHD1 332 aaPredicted RBP18.91■□□□□ 0.62
VAT1-208ENST00000590924 CACNA1BQ00975 2339 aa18.91■□□□□ 0.62
VAT1-208ENST00000590924 CILPO75339 1184 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 RHOBTB1O94844 696 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 ADRB1P08588 477 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 CHRM1P11229 460 aaPredicted RBP18.9■□□□□ 0.62
VAT1-208ENST00000590924 ADH5P11766 374 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 CCDC130P13994 396 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 DGKEP52429 567 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 MFAP3P55082 362 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 LRMPQ12912 555 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 NR1I3Q14994 352 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 CRY1Q16526 586 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 HSF5Q4G112 596 aaPredicted RBP18.9■□□□□ 0.62
VAT1-208ENST00000590924 PPM1JQ5JR12 505 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 DPY19L2P1Q6NXN4 242 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 SMOQ99835 787 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 CCSER2Q9H7U1 834 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 VPS45Q9NRW7 570 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 GMIPQ9P107 970 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 HMGXB4Q9UGU5 601 aa18.9■□□□□ 0.62
VAT1-208ENST00000590924 A0A0A0MRY4 1105 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 ANTXRLA6NF34 631 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.89■□□□□ 0.61
VAT1-208ENST00000590924 BEST1O76090 585 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 KAT7O95251 611 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 APODP05090 189 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 SLC6A11P48066 632 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 MESP2Q0VG99 397 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 KLHDC7AQ5VTJ3 777 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 C11orf74Q86VG3 221 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 C12orf40Q86WS4 652 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 UBR7Q8N806 425 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 NT5C1AQ9BXI3 368 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 FBXO44Q9H4M3 255 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 SIX2Q9NPC8 291 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 UBE2TQ9NPD8 197 aaPredicted RBP18.89■□□□□ 0.61
VAT1-208ENST00000590924 RXFP3Q9NSD7 469 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 CNTN6Q9UQ52 1028 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 SIK3Q9Y2K2 1263 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 SH3BP1Q9Y3L3 701 aa18.89■□□□□ 0.61
VAT1-208ENST00000590924 A0A1W2PQC6 194 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 DCLK1O15075 740 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 ACO1P21399 889 aaKnown RBP18.88■□□□□ 0.61
VAT1-208ENST00000590924 UBASH3AP57075 661 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 GAD2Q05329 585 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 ORC1Q13415 861 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 USP39Q53GS9 565 aaKnown RBP18.88■□□□□ 0.61
VAT1-208ENST00000590924 LY6G5CQ5SRR4 150 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 IL31Q6EBC2 164 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 ANO7Q6IWH7 933 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 RRAGAQ7L523 313 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 ARHGEF19Q8IW93 802 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 SFTPA1Q8IWL2 248 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 PHTF2Q8N3S3 785 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 CCDC33Q8N5R6 958 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 C12orf29Q8N999 325 aa18.88■□□□□ 0.61
VAT1-208ENST00000590924 RNF214Q8ND24 703 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms