RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 YJEFN3A6XGL0 299 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 E7ENQ6 273 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 STC2O76061 302 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 MBD3O95983 291 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 GNA15P30679 374 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 HOXC13P31276 330 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ZNF132P52740 706 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 KDSRQ06136 332 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 DMWDQ09019 674 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ZNF606Q8WXB4 792 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
TPM4-212ENST00000590180 GOLGA1Q92805 767 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 NELL1Q92832 810 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 HSFY1Q96LI6 401 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 DCLK3Q9C098 648 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 MIS12Q9H081 205 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ACP6Q9NPH0 428 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ST7Q9NRC1 585 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ANO10Q9NW15 660 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 WDR35Q9P2L0 1181 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 DEC1Q9P2X7 70 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 ZNF510Q9Y2H8 683 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 SDK1Q7Z5N4 2213 aa12.66□□□□□ -0.38
TPM4-212ENST00000590180 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 NEDD8-MDP1E9PL57 170 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 K7EQS6 105 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 K7ESF4 209 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 GREM1O60565 184 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 LILRB5O75023 590 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 GABBR2O75899 941 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 KAT7O95251 611 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 TDGF1P13385 188 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 EEF1GP26641 437 aaKnown RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 GRIA2P42262 883 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 GPD2P43304 727 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 DAOAP59103 153 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 TCP11X2Q5H9J9 407 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 CCDC183Q5T5S1 534 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 RBM43Q6ZSC3 357 aaKnown RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 NUDT18Q6ZVK8 323 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 C12orf40Q86WS4 652 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 DENND1CQ8IV53 801 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 SCUBE3Q8IX30 993 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 CCDC33Q8N5R6 958 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 BHMTQ93088 406 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 BBS2Q9BXC9 721 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 ABCC13Q9NSE7 274 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 OLA1Q9NTK5 396 aaKnown RBP12.65□□□□□ -0.38
TPM4-212ENST00000590180 SFMBT1Q9UHJ3 866 aa12.65□□□□□ -0.38
TPM4-212ENST00000590180 ANTXRLA6NF34 631 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 BECN2A8MW95 431 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 FOXN3O00409 490 aaPredicted RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 TULP3O75386 442 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 FBXO21O94952 628 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 PAPSS2O95340 614 aaPredicted RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 KLKB1P03952 638 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 TPM2P07951 284 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 TYRP14679 529 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 CORO1AP31146 461 aaKnown RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 TIE1P35590 1138 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 CHKAP35790 457 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 EIF2DP41214 584 aaKnown RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 ACADSBP45954 432 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 PTK2Q05397 1052 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 DMC1Q14565 340 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 LPAL2Q16609 132 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 PREPLQ4J6C6 727 aaPredicted RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 MIIPQ5JXC2 388 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 EMC10Q5UCC4 262 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 PRR23BQ6ZRT6 265 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 BHLHA9Q7RTU4 235 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 SCML4Q8N228 414 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 SUMF1Q8NBK3 374 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 USP33Q8TEY7 942 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 IRGQQ8WZA9 623 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 ACDQ96AP0 544 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 VPS16Q9H269 839 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 SIX2Q9NPC8 291 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 DNAJC17Q9NVM6 304 aaKnown RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 FANCLQ9NW38 375 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 TAB2Q9NYJ8 693 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 PLK2Q9NYY3 685 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 RAB23Q9ULC3 237 aa12.64□□□□□ -0.39
TPM4-212ENST00000590180 HELZP42694 1942 aaKnown RBP12.64□□□□□ -0.39
TPM4-212ENST00000590180 A0A0A0MRY4 1105 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 TRIM24O15164 1050 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 HRO43593 1189 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 LTFP02788 710 aa12.63□□□□□ -0.39
TPM4-212ENST00000590180 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
TPM4-212ENST00000590180 HOXA6P31267 233 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms