RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ERLEC1Q96DZ1 483 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 BBS2Q9BXC9 721 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 DNAJC17Q9NVM6 304 aaKnown RBP18.96■□□□□ 0.63
H3F3B-209ENST00000589949 MARK1Q9P0L2 795 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 DNMT3LQ9UJW3 386 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 NAGPAQ9UK23 515 aa18.96■□□□□ 0.63
H3F3B-209ENST00000589949 TPRP12270 2363 aaKnown RBP18.96■□□□□ 0.63
H3F3B-209ENST00000589949 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 A0A1W2PQF6 199 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 TRIM49BA6NDI0 452 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 TULP2O00295 520 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 CETN3O15182 167 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 CISD3P0C7P0 127 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 GABRG2P18507 467 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 KCNA4P22459 653 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 PTGER3P43115 390 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 N4BP2L1Q5TBK1 243 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-209ENST00000589949 TMEFF1Q8IYR6 380 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 SPATA20Q8TB22 786 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 NDRG1Q92597 394 aaKnown RBP18.95■□□□□ 0.62
H3F3B-209ENST00000589949 BHMTQ93088 406 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 TMEM176AQ96HP8 235 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 EDEM2Q9BV94 578 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 LSM14BQ9BX40 385 aaKnown RBP18.95■□□□□ 0.62
H3F3B-209ENST00000589949 POLMQ9NP87 494 aaPredicted RBP18.95■□□□□ 0.62
H3F3B-209ENST00000589949 PLK2Q9NYY3 685 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 STARD13Q9Y3M8 1113 aa18.95■□□□□ 0.62
H3F3B-209ENST00000589949 ALDH1A2O94788 518 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 EPB41P11171 864 aaKnown RBP18.94■□□□□ 0.62
H3F3B-209ENST00000589949 PLA2G4AP47712 749 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 DHPSP49366 369 aaPredicted RBP18.94■□□□□ 0.62
H3F3B-209ENST00000589949 IRX4P78413 519 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 RAB41Q5JT25 222 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 ZNF658Q5TYW1 1059 aaPredicted RBP18.94■□□□□ 0.62
H3F3B-209ENST00000589949 RNF43Q68DV7 783 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 ARHGAP17Q68EM7 881 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 GRAMD4Q6IC98 578 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 KIAA1211LQ6NV74 962 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 BHLHA9Q7RTU4 235 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 PIGZQ86VD9 579 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 ZNF276Q8N554 614 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 CCDC150Q8NCX0 1101 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 TMEM74BQ9NUR3 256 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
H3F3B-209ENST00000589949 COQ4Q9Y3A0 265 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 ACACBO00763 2458 aa18.94■□□□□ 0.62
H3F3B-209ENST00000589949 C4orf47A7E2U8 309 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 CDX4O14627 284 aaPredicted RBP18.93■□□□□ 0.62
H3F3B-209ENST00000589949 COBLL1Q53SF7 1204 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 DCAF17Q5H9S7 520 aaPredicted RBP18.93■□□□□ 0.62
H3F3B-209ENST00000589949 ARMCX6Q7L4S7 300 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 CYP2U1Q7Z449 544 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 KCNV2Q8TDN2 545 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 FAXDC2Q96IV6 333 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 CLIC5Q9NZA1 410 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 BCCIPQ9P287 314 aaKnown RBP eCLIP18.93■□□□□ 0.62
H3F3B-209ENST00000589949 LSM7Q9UK45 103 aaKnown RBP18.93■□□□□ 0.62
H3F3B-209ENST00000589949 EPG5Q9HCE0 2579 aa18.93■□□□□ 0.62
H3F3B-209ENST00000589949 TNRC6BQ9UPQ9 1833 aaKnown RBP18.93■□□□□ 0.62
H3F3B-209ENST00000589949 HMBSP08397 361 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 HOXB2P14652 356 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 CD44P16070 742 aaKnown RBP18.92■□□□□ 0.62
H3F3B-209ENST00000589949 NTSR1P30989 418 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 EFEMP1Q12805 493 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 C11orf74Q86VG3 221 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 UBR7Q8N806 425 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 PIGKQ92643 395 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 SLC35C1Q96A29 364 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 GSDMAQ96QA5 445 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 SLC6A17Q9H1V8 727 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 CD93Q9NPY3 652 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 WDR35Q9P2L0 1181 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 RASAL2Q9UJF2 1139 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 FBXO10Q9UK96 956 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 PLXND1Q9Y4D7 1925 aa18.92■□□□□ 0.62
H3F3B-209ENST00000589949 CHD8Q9HCK8 2581 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 WASH3PC4AMC7 463 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 GIPC1O14908 333 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 SLC16A3O15427 465 aaKnown RBP18.91■□□□□ 0.62
H3F3B-209ENST00000589949 KCNK5O95279 499 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 TRIM21P19474 475 aaKnown RBP18.91■□□□□ 0.62
H3F3B-209ENST00000589949 PSEN1P49768 467 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 GOLGA8FQ08AF8 430 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 GOLGA8DPQ0D2H9 430 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 GOLGA7BQ2TAP0 167 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 TCERG1LQ5VWI1 586 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 FYB2Q5VWT5 728 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 ISM2Q6H9L7 571 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 PGBD3Q8N328 593 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 DEFB119Q8N690 84 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
H3F3B-209ENST00000589949 UBXN6Q9BZV1 441 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 RMND1Q9NWS8 449 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 CALCOCO1Q9P1Z2 691 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 AGO1Q9UL18 857 aaKnown RBP18.91■□□□□ 0.62
H3F3B-209ENST00000589949 CLEC4EQ9ULY5 219 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 RAD54BQ9Y620 910 aa18.91■□□□□ 0.62
H3F3B-209ENST00000589949 KMT2BQ9UMN6 2715 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms