RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 PIK3R2O00459 728 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 SETSIPP0DME0 302 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 CDK11BP21127 795 aaKnown RBP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 RGS7P49802 495 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 KLK7P49862 253 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 YWHAGP61981 247 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 GAD2Q05329 585 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 MESP2Q0VG99 397 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 EFEMP1Q12805 493 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 CNGA2Q16280 664 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 ANO4Q32M45 955 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 KLHDC10Q6PID8 442 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 LCLAT1Q6UWP7 414 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 PRR23BQ6ZRT6 265 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 RSRC2Q7L4I2 434 aaKnown RBP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 ENOSF1Q7L5Y1 443 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 LONP2Q86WA8 852 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 SFTPA1Q8IWL2 248 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 ARHGAP18Q8N392 663 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 DCLK2Q8N568 766 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 RUBCNQ92622 972 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 ACDQ96AP0 544 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 LSM14BQ9BX40 385 aaKnown RBP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 UBXN6Q9BZV1 441 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 SPHK2Q9NRA0 654 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.96■□□□□ 0.15
ERCC1-209ENST00000589214 USP34Q70CQ2 3546 aa15.96■□□□□ 0.15
ERCC1-209ENST00000589214 HOXC11O43248 304 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 GREM1O60565 184 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 ZBED1O96006 694 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 HMBSP08397 361 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 ATP1A3P13637 1013 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 LCP1P13796 627 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 EIF2DP41214 584 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 PLA2G4AP47712 749 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 COPB1P53618 953 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 DMC1Q14565 340 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 PKDCCQ504Y2 493 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 C2orf27AQ580R0 203 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 BTBD8Q5XKL5 378 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 HTR3DQ70Z44 454 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 TMEM25Q86YD3 366 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 DHX40Q8IX18 779 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 SIX6OS1Q8N1H7 587 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 NAT16Q8N8M0 369 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 SECISBP2LQ93073 1101 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 CDK5RAP1Q96SZ6 601 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 PNKPQ96T60 521 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 FUCA2Q9BTY2 467 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 ARHGEF4Q9NR80 690 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 LIMA1Q9UHB6 759 aaKnown RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 RAB23Q9ULC3 237 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 FHOD1Q9Y613 1164 aa15.95■□□□□ 0.14
ERCC1-209ENST00000589214 ZFHX2Q9C0A1 2572 aaPredicted RBP15.95■□□□□ 0.14
ERCC1-209ENST00000589214 VPS13AQ96RL7 3174 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-209ENST00000589214 NEDD8-MDP1E9PL57 170 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 K7EQS6 105 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 FOXN3O00409 490 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-209ENST00000589214 THAP12O43422 761 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 GABBR2O75899 941 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 STC2O76061 302 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 KAT7O95251 611 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 APODP05090 189 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 PTMSP20962 102 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 RAPGEF1Q13905 1077 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 SIM2Q14190 667 aaPredicted RBP15.94■□□□□ 0.14
ERCC1-209ENST00000589214 KLHDC7AQ5VTJ3 777 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 PMF1Q6P1K2 205 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 DENND1BQ6P3S1 775 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 TPGS1Q6ZTW0 290 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 SYT13Q7L8C5 426 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 WDR5BQ86VZ2 330 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 ETFBKMTQ8IXQ9 262 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 USP33Q8TEY7 942 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 SHC3Q92529 594 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 FAM81BQ96LP2 452 aa15.94■□□□□ 0.14
ERCC1-209ENST00000589214 HRO43593 1189 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 TULP3O75386 442 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 TPM2P07951 284 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 ZNF18P17022 549 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 GNA15P30679 374 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 HOXA6P31267 233 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 ZNF165P49910 485 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 STILQ15468 1287 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 PM20D1Q6GTS8 502 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 Q6ZNB5 142 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 CEP68Q76N32 757 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 KIAA2013Q8IYS2 634 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 ZNF276Q8N554 614 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 CCDC33Q8N5R6 958 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 CCDC26Q8TAB7 109 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 SLC35F5Q8WV83 523 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 ZNF606Q8WXB4 792 aa15.93■□□□□ 0.14
ERCC1-209ENST00000589214 KCTD13Q8WZ19 329 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms