RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 RARGP13631 454 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
LINC01842-201ENST00000588275 PFKFB1P16118 471 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 SPDYCQ5MJ68 293 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 C10orf120Q5SQS8 335 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 SLC23A3Q6PIS1 610 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 SLC36A4Q6YBV0 504 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 TOGARAM2Q6ZUX3 1019 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 CYFIP2Q96F07 1278 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 DUSP9Q99956 384 aaKnown RBP17.72■□□□□ 0.43
LINC01842-201ENST00000588275 NMUR1Q9HB89 426 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 WDR35Q9P2L0 1181 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 NAGPAQ9UK23 515 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 PILRBQ9UKJ0 227 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 SCML2Q9UQR0 700 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 RAD54BQ9Y620 910 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 CFAP47Q6ZTR5 3102 aa17.72■□□□□ 0.43
LINC01842-201ENST00000588275 A0A1W2PQF6 199 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 CACNG3O60359 315 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 GREM1O60565 184 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 NDUFV2P19404 249 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 GCLMP48507 274 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 DGKGP49619 791 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 VAMP7P51809 220 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 GFPT1Q06210 699 aaPredicted RBP17.71■□□□□ 0.43
LINC01842-201ENST00000588275 ZNF33AQ06730 810 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 DUOXA1Q1HG43 343 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 HDDC3Q8N4P3 179 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 IPO4Q8TEX9 1081 aaKnown RBP17.71■□□□□ 0.43
LINC01842-201ENST00000588275 HNRNPABQ99729 332 aaKnown RBP17.71■□□□□ 0.43
LINC01842-201ENST00000588275 NT5C1AQ9BXI3 368 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 ADAM33Q9BZ11 813 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 SLC6A17Q9H1V8 727 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 PLK2Q9NYY3 685 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 RCOR1Q9UKL0 485 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 RALYQ9UKM9 306 aaKnown RBP17.71■□□□□ 0.43
LINC01842-201ENST00000588275 SLC6A14Q9UN76 642 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 STARD13Q9Y3M8 1113 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 PCDHA5Q9Y5H7 936 aa17.71■□□□□ 0.43
LINC01842-201ENST00000588275 IGHV1OR15-9A0A0B4J2B8 117 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 PRRT4C9JH25 899 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 HHLA1C9JL84 531 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 IKBKBO14920 756 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 NR2F2P24468 414 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 C1orf220Q5T0J3 134 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 KIAA1324Q6UXG2 1013 aaKnown RBP17.7■□□□□ 0.42
LINC01842-201ENST00000588275 RGL4Q8IZJ4 473 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 CCDC150Q8NCX0 1101 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 CEP76Q8TAP6 659 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 TAS1R2Q8TE23 839 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 CCDC47Q96A33 483 aaKnown RBP17.7■□□□□ 0.42
LINC01842-201ENST00000588275 HSPA12BQ96MM6 686 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 SCNM1Q9BWG6 230 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 APOBEC3GQ9HC16 384 aaKnown RBP17.7■□□□□ 0.42
LINC01842-201ENST00000588275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.7■□□□□ 0.42
LINC01842-201ENST00000588275 MARK1Q9P0L2 795 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 RASAL2Q9UJF2 1139 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 DNMT3LQ9UJW3 386 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 MAPK8IP1Q9UQF2 711 aa17.7■□□□□ 0.42
LINC01842-201ENST00000588275 CHD6Q8TD26 2715 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 SPAARA0A1B0GVQ0 90 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 ZNF217O75362 1048 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 HMBSP08397 361 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 KRT13P13646 458 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 HOXD12P35452 270 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 INCA1Q0VD86 236 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 ZNF394Q53GI3 561 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
LINC01842-201ENST00000588275 TRIML1Q8N9V2 468 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 OR2I1PQ8NGU4 316 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 TMEM174Q8WUU8 243 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 NIF3L1Q9GZT8 377 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 ZMIZ1Q9ULJ6 1067 aa17.69■□□□□ 0.42
LINC01842-201ENST00000588275 OPHN1O60890 802 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 NDUFS2O75306 463 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 SERPINF2P08697 491 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 RALAP11233 206 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 SIM1P81133 766 aaPredicted RBP17.68■□□□□ 0.42
LINC01842-201ENST00000588275 PPP3CAQ08209 521 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 INTS8Q75QN2 995 aaKnown RBP17.68■□□□□ 0.42
LINC01842-201ENST00000588275 RABEPKQ7Z6M1 372 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 TADA2BQ86TJ2 420 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 SLC41A1Q8IVJ1 513 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 FAM186BQ8IYM0 893 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 MINDY1Q8N5J2 469 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 SPATA32Q96LK8 384 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 GABRG3Q99928 467 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 DNAI2Q9GZS0 605 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 CYP3A43Q9HB55 503 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 PNPLA8Q9NP80 782 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 USP25Q9UHP3 1055 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 WASF3Q9UPY6 502 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 TRAF3IP3Q9Y228 551 aa17.68■□□□□ 0.42
LINC01842-201ENST00000588275 IGF2RP11717 2491 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms