RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CCDC186Q7Z3E2 898 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 ENGASEQ8NFI3 743 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 TSG101Q99816 390 aa15.09■□□□□ 0.01
VMP1-206ENST00000587945 MBD1Q9UIS9 605 aaPredicted RBP15.09■□□□□ 0.01
VMP1-206ENST00000587945 HELZP42694 1942 aaKnown RBP15.08■□□□□ 0
VMP1-206ENST00000587945 PATE3B3GLJ2 98 aa15.08■□□□□ 0
VMP1-206ENST00000587945 PRRT4C9JH25 899 aa15.08■□□□□ 0
VMP1-206ENST00000587945 STX10O60499 249 aa15.08■□□□□ 0
VMP1-206ENST00000587945 STC2O76061 302 aa15.08■□□□□ 0
VMP1-206ENST00000587945 KLKB1P03952 638 aa15.08■□□□□ 0
VMP1-206ENST00000587945 HMBSP08397 361 aa15.08■□□□□ 0
VMP1-206ENST00000587945 P2RY2P41231 377 aa15.08■□□□□ 0
VMP1-206ENST00000587945 RNF43Q68DV7 783 aa15.08■□□□□ 0
VMP1-206ENST00000587945 ISM2Q6H9L7 571 aa15.08■□□□□ 0
VMP1-206ENST00000587945 Q6ZNB5 142 aa15.08■□□□□ 0
VMP1-206ENST00000587945 ARMCX6Q7L4S7 300 aa15.08■□□□□ 0
VMP1-206ENST00000587945 CYP2U1Q7Z449 544 aa15.08■□□□□ 0
VMP1-206ENST00000587945 PIGZQ86VD9 579 aa15.08■□□□□ 0
VMP1-206ENST00000587945 C11orf74Q86VG3 221 aa15.08■□□□□ 0
VMP1-206ENST00000587945 ZC3H3Q8IXZ2 948 aaKnown RBP15.08■□□□□ 0
VMP1-206ENST00000587945 NDRG1Q92597 394 aaKnown RBP15.08■□□□□ 0
VMP1-206ENST00000587945 SMARCE1Q969G3 411 aa15.08■□□□□ 0
VMP1-206ENST00000587945 GSDMAQ96QA5 445 aa15.08■□□□□ 0
VMP1-206ENST00000587945 XPO6Q96QU8 1125 aaKnown RBP15.08■□□□□ 0
VMP1-206ENST00000587945 ACOX2Q99424 681 aa15.08■□□□□ 0
VMP1-206ENST00000587945 EDEM2Q9BV94 578 aa15.08■□□□□ 0
VMP1-206ENST00000587945 DNAI2Q9GZS0 605 aa15.08■□□□□ 0
VMP1-206ENST00000587945 PLK2Q9NYY3 685 aa15.08■□□□□ 0
VMP1-206ENST00000587945 MARK1Q9P0L2 795 aa15.08■□□□□ 0
VMP1-206ENST00000587945 WDR35Q9P2L0 1181 aa15.08■□□□□ 0
VMP1-206ENST00000587945 RASAL2Q9UJF2 1139 aa15.08■□□□□ 0
VMP1-206ENST00000587945 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.07■□□□□ 0
VMP1-206ENST00000587945 TULP2O00295 520 aa15.07■□□□□ 0
VMP1-206ENST00000587945 SLC16A3O15427 465 aaKnown RBP15.07■□□□□ 0
VMP1-206ENST00000587945 MAP3K13O43283 966 aa15.07■□□□□ 0
VMP1-206ENST00000587945 CACNG3O60359 315 aa15.07■□□□□ 0
VMP1-206ENST00000587945 SMC2O95347 1197 aa15.07■□□□□ 0
VMP1-206ENST00000587945 RALAP11233 206 aa15.07■□□□□ 0
VMP1-206ENST00000587945 FKBP3Q00688 224 aaKnown RBP15.07■□□□□ 0
VMP1-206ENST00000587945 EFEMP1Q12805 493 aa15.07■□□□□ 0
VMP1-206ENST00000587945 LRMPQ12912 555 aa15.07■□□□□ 0
VMP1-206ENST00000587945 MAP7D1Q3KQU3 841 aa15.07■□□□□ 0
VMP1-206ENST00000587945 PREPLQ4J6C6 727 aaPredicted RBP15.07■□□□□ 0
VMP1-206ENST00000587945 COBLL1Q53SF7 1204 aa15.07■□□□□ 0
VMP1-206ENST00000587945 ARHGAP17Q68EM7 881 aa15.07■□□□□ 0
VMP1-206ENST00000587945 TMEFF1Q8IYR6 380 aa15.07■□□□□ 0
VMP1-206ENST00000587945 TTC39CQ8N584 583 aa15.07■□□□□ 0
VMP1-206ENST00000587945 ANKRD52Q8NB46 1076 aa15.07■□□□□ 0
VMP1-206ENST00000587945 SPATA20Q8TB22 786 aa15.07■□□□□ 0
VMP1-206ENST00000587945 PIGKQ92643 395 aa15.07■□□□□ 0
VMP1-206ENST00000587945 FAXDC2Q96IV6 333 aa15.07■□□□□ 0
VMP1-206ENST00000587945 CLIC5Q9NZA1 410 aa15.07■□□□□ 0
VMP1-206ENST00000587945 STARD13Q9Y3M8 1113 aa15.07■□□□□ 0
VMP1-206ENST00000587945 A0A1W2PQF6 199 aa15.06■□□□□ 0
VMP1-206ENST00000587945 LNP1A1A4G5 178 aa15.06■□□□□ 0
VMP1-206ENST00000587945 C4orf47A7E2U8 309 aa15.06■□□□□ 0
VMP1-206ENST00000587945 CISD3P0C7P0 127 aa15.06■□□□□ 0
VMP1-206ENST00000587945 HOXB2P14652 356 aa15.06■□□□□ 0
VMP1-206ENST00000587945 GABRG2P18507 467 aa15.06■□□□□ 0
VMP1-206ENST00000587945 NTSR1P30989 418 aa15.06■□□□□ 0
VMP1-206ENST00000587945 PTGER3P43115 390 aa15.06■□□□□ 0
VMP1-206ENST00000587945 PSEN1P49768 467 aa15.06■□□□□ 0
VMP1-206ENST00000587945 CUL2Q13617 745 aa15.06■□□□□ 0
VMP1-206ENST00000587945 BECN1Q14457 450 aa15.06■□□□□ 0
VMP1-206ENST00000587945 GOLGA7BQ2TAP0 167 aa15.06■□□□□ 0
VMP1-206ENST00000587945 RAB41Q5JT25 222 aa15.06■□□□□ 0
VMP1-206ENST00000587945 NUDT18Q6ZVK8 323 aa15.06■□□□□ 0
VMP1-206ENST00000587945 LPCAT2Q7L5N7 544 aa15.06■□□□□ 0
VMP1-206ENST00000587945 TRMT11Q7Z4G4 463 aaKnown RBP15.06■□□□□ 0
VMP1-206ENST00000587945 TADA2BQ86TJ2 420 aa15.06■□□□□ 0
VMP1-206ENST00000587945 CHPFQ8IZ52 775 aa15.06■□□□□ 0
VMP1-206ENST00000587945 DEFB119Q8N690 84 aa15.06■□□□□ 0
VMP1-206ENST00000587945 KCNV2Q8TDN2 545 aa15.06■□□□□ 0
VMP1-206ENST00000587945 DDX1Q92499 740 aaKnown RBP15.06■□□□□ 0
VMP1-206ENST00000587945 SPACA7Q96KW9 195 aa15.06■□□□□ 0
VMP1-206ENST00000587945 ARMCX3Q9UH62 379 aaPredicted RBP15.06■□□□□ 0
VMP1-206ENST00000587945 COQ4Q9Y3A0 265 aa15.06■□□□□ 0
VMP1-206ENST00000587945 KHNYNO15037 678 aaKnown RBP15.05■□□□□ -0
VMP1-206ENST00000587945 CD44P16070 742 aaKnown RBP15.05■□□□□ -0
VMP1-206ENST00000587945 CORO1AP31146 461 aaKnown RBP15.05■□□□□ -0
VMP1-206ENST00000587945 DGKGP49619 791 aa15.05■□□□□ -0
VMP1-206ENST00000587945 TKTL1P51854 596 aa15.05■□□□□ -0
VMP1-206ENST00000587945 YWHAGP61981 247 aaKnown RBP eCLIP15.05■□□□□ -0
VMP1-206ENST00000587945 IRX4P78413 519 aa15.05■□□□□ -0
VMP1-206ENST00000587945 NUCB2P80303 420 aa15.05■□□□□ -0
VMP1-206ENST00000587945 PDE4CQ08493 712 aa15.05■□□□□ -0
VMP1-206ENST00000587945 N4BP2L1Q5TBK1 243 aaPredicted RBP15.05■□□□□ -0
VMP1-206ENST00000587945 KIAA1211LQ6NV74 962 aa15.05■□□□□ -0
VMP1-206ENST00000587945 ZNF276Q8N554 614 aa15.05■□□□□ -0
VMP1-206ENST00000587945 UBA3Q8TBC4 463 aa15.05■□□□□ -0
VMP1-206ENST00000587945 SLC35C1Q96A29 364 aa15.05■□□□□ -0
VMP1-206ENST00000587945 LSM14BQ9BX40 385 aaKnown RBP15.05■□□□□ -0
VMP1-206ENST00000587945 ULBP1Q9BZM6 244 aa15.05■□□□□ -0
VMP1-206ENST00000587945 UBXN6Q9BZV1 441 aa15.05■□□□□ -0
VMP1-206ENST00000587945 CACNA2D2Q9NY47 1150 aa15.05■□□□□ -0
VMP1-206ENST00000587945 MARCH2Q9P0N8 246 aa15.05■□□□□ -0
VMP1-206ENST00000587945 CALCOCO1Q9P1Z2 691 aa15.05■□□□□ -0
VMP1-206ENST00000587945 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
VMP1-206ENST00000587945 TSPAN16Q9UKR8 245 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms