RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NT5C1AQ9BXI3 368 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 NIF3L1Q9GZT8 377 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 TMEM9BQ9NQ34 198 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 CYLDQ9NQC7 956 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 COMMD8Q9NX08 183 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 CALCOCO1Q9P1Z2 691 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 USP25Q9UHP3 1055 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 RAD54BQ9Y620 910 aa16.02■□□□□ 0.16
PRKCSH-204ENST00000587290 WDFY3Q8IZQ1 3526 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 PCDH15Q96QU1 1955 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 A0A1W2PQF6 199 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 CILPO75339 1184 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 ITPKAP23677 461 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 ATP5C1P36542 298 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 HSF5Q4G112 596 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 TRIM61Q5EBN2 209 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 C10orf120Q5SQS8 335 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 PPP1R26Q5T8A7 1209 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 LPCAT2Q7L5N7 544 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 SCD5Q86SK9 330 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 C11orf74Q86VG3 221 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 IMPG2Q9BZV3 1241 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■□□□□ 9.8
PRKCSH-204ENST00000587290 NAGPAQ9UK23 515 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 PCNX2A6NKB5 2137 aa16.01■□□□□ 0.15
PRKCSH-204ENST00000587290 IGF2RP11717 2491 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 FAM237AA0A1B0GTK4 181 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 CACNG3O60359 315 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 HMBSP08397 361 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 KRT13P13646 458 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 ZNF252P-AS1Q0IIN9 211 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 ZCWPW2Q504Y3 356 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 DAB2IPQ5VWQ8 1189 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 KRBA2Q6ZNG9 492 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 INTS8Q75QN2 995 aaKnown RBP16■□□□□ 0.15
PRKCSH-204ENST00000587290 CHPFQ8IZ52 775 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 CACNA2D2Q9NY47 1150 aa16■□□□□ 0.15
PRKCSH-204ENST00000587290 WASH3PC4AMC7 463 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 STC2O76061 302 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 KLKB1P03952 638 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 MYL1P05976 194 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 NDUFV2P19404 249 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 NTSR1P30989 418 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 PSMC2P35998 433 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 KIF11P52732 1056 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 RPL6Q02878 288 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 FOXC1Q12948 553 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 ADAM9Q13443 819 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 LYSMD4Q5XG99 296 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 Q6ZNB5 142 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 GUF1Q8N442 669 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 DEFB124Q8NES8 71 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 OR2I1PQ8NGU4 316 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 DUSP9Q99956 384 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 CYP3A43Q9HB55 503 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 CD248Q9HCU0 757 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 RASAL2Q9UJF2 1139 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 DNMT3LQ9UJW3 386 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 LSM7Q9UK45 103 aaKnown RBP15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 CYP8B1Q9UNU6 501 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
PRKCSH-204ENST00000587290 MAPK13O15264 365 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 CFIP05156 583 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 ENGP17813 658 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 SHC2P98077 582 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 NFIL3Q16649 462 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 TRMT11Q7Z4G4 463 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 SYT12Q8IV01 421 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 IPO4Q8TEX9 1081 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 NDRG1Q92597 394 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 TATDN2Q93075 761 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 CCDC47Q96A33 483 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 HEXIM2Q96MH2 286 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 XPO6Q96QU8 1125 aaKnown RBP15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 DUSP16Q9BY84 665 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 MARK1Q9P0L2 795 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 AKAP13Q12802 2813 aa15.98■□□□□ 0.15
PRKCSH-204ENST00000587290 CKAP5Q14008 2032 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 NUMA1Q14980 2115 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 IGHV1OR15-9A0A0B4J2B8 117 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 TULP2O00295 520 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 ZNF202O95125 648 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 CISD3P0C7P0 127 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 DGKGP49619 791 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 MXI1P50539 228 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 RAD23BP54727 409 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 GOLGA8FQ08AF8 430 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 GOLGA8DPQ0D2H9 430 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 EFEMP1Q12805 493 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 PNOCQ13519 176 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 CCDC186Q7Z3E2 898 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 SLC4A11Q8NBS3 891 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 NUSAP1Q9BXS6 441 aaKnown RBP15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 PNPLA8Q9NP80 782 aa15.97■□□□□ 0.15
PRKCSH-204ENST00000587290 CISHQ9NSE2 258 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms