RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 GOLGA1Q92805 767 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 NT5C1BQ96P26 610 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 IPO9Q96P70 1041 aaKnown RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 LRRC4Q9HBW1 653 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 DNAJC17Q9NVM6 304 aaKnown RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
ACTN4-209ENST00000586538 STARD13Q9Y3M8 1113 aa11.82□□□□□ -0.52
ACTN4-209ENST00000586538 CACNA1AO00555 2505 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 DMXL1Q9Y485 3027 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 GFRA2O00451 464 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 MAP3K13O43283 966 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 ZNF217O75362 1048 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 PAEPP09466 180 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 TYRP14679 529 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CD19P15391 556 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 KIR2DL1P43626 348 aaPredicted RBP11.81□□□□□ -0.52
ACTN4-209ENST00000586538 DGKGP49619 791 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 ZNF132P52740 706 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 RAD23BP54727 409 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CREB5Q02930 508 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CBWD6Q4V339 395 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 RAB41Q5JT25 222 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CBWD3Q5JTY5 395 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CBWD5Q5RIA9 395 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 SLC36A4Q6YBV0 504 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 LPCAT2Q7L5N7 544 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 GPRIN1Q7Z2K8 1008 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CYP2U1Q7Z449 544 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 RABEPKQ7Z6M1 372 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 PIGZQ86VD9 579 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 C12orf40Q86WS4 652 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 TTC30AQ86WT1 665 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 MIB1Q86YT6 1006 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 SIX6OS1Q8N1H7 587 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 PGBD3Q8N328 593 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CCDC33Q8N5R6 958 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 NAT16Q8N8M0 369 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 TRIML1Q8N9V2 468 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 MDGA1Q8NFP4 955 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 RNF139Q8WU17 664 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 PLD4Q96BZ4 506 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 EEF2KMTQ96G04 330 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 FAM81BQ96LP2 452 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 TPSD1Q9BZJ3 242 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 DUSP15Q9H1R2 295 aaPredicted RBP11.81□□□□□ -0.52
ACTN4-209ENST00000586538 RASAL2Q9UJF2 1139 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 TSPAN16Q9UKR8 245 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 CEP250Q9BV73 2442 aa11.81□□□□□ -0.52
ACTN4-209ENST00000586538 ATG2BQ96BY7 2078 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 TCRBV21S2A2A0A5A6 115 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 SCAMP3O14828 347 aaKnown RBP11.8□□□□□ -0.52
ACTN4-209ENST00000586538 AP5Z1O43299 807 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 CAVIN2O95810 425 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 ZBED1O96006 694 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
ACTN4-209ENST00000586538 HOXB2P14652 356 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 NTSR1P30989 418 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 HOXD12P35452 270 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 SLC6A11P48066 632 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 FMO5P49326 533 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
ACTN4-209ENST00000586538 TKTL1P51854 596 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 YWHAGP61981 247 aaKnown RBP eCLIP11.8□□□□□ -0.52
ACTN4-209ENST00000586538 PAK1Q13153 545 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 STARD3Q14849 445 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 TPGS1Q6ZTW0 290 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 TMEM25Q86YD3 366 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 CHPFQ8IZ52 775 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 SCML4Q8N228 414 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 ZNF557Q8N988 423 aaPredicted RBP11.8□□□□□ -0.52
ACTN4-209ENST00000586538 TRIM62Q9BVG3 475 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 CNGB3Q9NQW8 809 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 MARCH2Q9P0N8 246 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 DNAH14Q0VDD8 3507 aa11.8□□□□□ -0.52
ACTN4-209ENST00000586538 BCLAF3A2AJT9 711 aaKnown RBP11.79□□□□□ -0.52
ACTN4-209ENST00000586538 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 SGK1O00141 431 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
ACTN4-209ENST00000586538 STC2O76061 302 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 LATS1O95835 1130 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 TBX18O95935 607 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 GCNT1Q02742 428 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 ARID5AQ03989 594 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 EFEMP1Q12805 493 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 LMAN2Q12907 356 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 EIF4HQ15056 248 aaKnown RBP11.79□□□□□ -0.52
ACTN4-209ENST00000586538 DAB2IPQ5VWQ8 1189 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 RNF43Q68DV7 783 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 SMYD5Q6GMV2 418 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 PM20D1Q6GTS8 502 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 Q6ZNB5 142 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 PPM1KQ8N3J5 372 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 PHTF2Q8N3S3 785 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 CPXM2Q8N436 756 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 OLIG1Q8TAK6 271 aa11.79□□□□□ -0.52
ACTN4-209ENST00000586538 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms