RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 FLT3P36888 993 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 SMARCB1Q12824 385 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 MTMR3Q13615 1198 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 PPP1R7Q15435 360 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 NFE2Q16621 373 aaPredicted RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 ATP13A4Q4VNC1 1196 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 RAB41Q5JT25 222 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 KIAA0319Q5VV43 1072 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 CEP128Q6ZU80 1094 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 BBS12Q6ZW61 710 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 SND1Q7KZF4 910 aaKnown RBP eCLIP10.84□□□□□ -0.67
LIG3-203ENST00000585370 BEND5Q7L4P6 421 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 ZDHHC14Q8IZN3 488 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 CCDC89Q8N998 374 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 RAPGEF5Q92565 580 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 PCED1BQ96HM7 432 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 CASD1Q96PB1 797 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 PAAF1Q9BRP4 392 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 HEMGNQ9BXL5 484 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 KRT82Q9NSB4 513 aa10.84□□□□□ -0.67
LIG3-203ENST00000585370 MTRF1LQ9UGC7 380 aaKnown RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 TIMM13Q9Y5L4 95 aaPredicted RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 MRPL42Q9Y6G3 142 aaKnown RBP10.84□□□□□ -0.67
LIG3-203ENST00000585370 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 OR6C75A6NL08 312 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 C3orf70A6NLC5 250 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 CLDN5O00501 218 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 DAPK3O43293 454 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 DDHD2O94830 711 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 CSPG5O95196 566 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 F9P00740 461 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 MYBL2P10244 700 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 ZFXP17010 805 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 IBSPP21815 317 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 IL1R2P27930 398 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 BRCC3P46736 316 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 OR1G1P47890 313 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 ARSEP51690 589 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 TKTL1P51854 596 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 AIF1P55008 147 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 MAP3K7CLP57077 242 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 MRPS25P82663 173 aaKnown RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 ZP2Q05996 745 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 CALCOCO2Q13137 446 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 PTK6Q13882 451 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 SLC25A52Q3SY17 297 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 HSP90B2PQ58FF3 399 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 CFAP58Q5T655 872 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 ERMARDQ5T6L9 678 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 TTC27Q6P3X3 843 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 ZNF280BQ86YH2 543 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 SPATA2LQ8IUW3 424 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 CMTR2Q8IYT2 770 aaKnown RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 FAM71BQ8TC56 605 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 SPPL3Q8TCT6 385 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 FAM172AQ8WUF8 416 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 C1orf54Q8WWF1 131 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 NKD2Q969F2 451 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 NT5C3BQ969T7 300 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 FUBP3Q96I24 572 aaKnown RBP eCLIP10.83□□□□□ -0.68
LIG3-203ENST00000585370 SLC2A13Q96QE2 648 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 PKMYT1Q99640 499 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 SMOQ99835 787 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 RTP3Q9BQQ7 232 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 DMAP1Q9NPF5 467 aaPredicted RBP10.83□□□□□ -0.68
LIG3-203ENST00000585370 MED4Q9NPJ6 270 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 WHRNQ9P202 907 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 PCSK1NQ9UHG2 260 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 FAN1Q9Y2M0 1017 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 HCN4Q9Y3Q4 1203 aa10.83□□□□□ -0.68
LIG3-203ENST00000585370 PRR33A8MZF0 331 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 H7C4K7 107 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 PIK3R2O00459 728 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 LINC01565O15544 149 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 LIASO43766 372 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 OPA1O60313 960 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 GRAP2O75791 330 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ZNF189O75820 626 aaPredicted RBP10.82□□□□□ -0.68
LIG3-203ENST00000585370 SASH3O75995 380 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ZBED1O96006 694 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ITGB1P05556 798 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ITGAVP06756 1048 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ALADP13716 330 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 TCF4P15884 667 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 IRS1P35568 1242 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 HSPA9P38646 679 aaKnown RBP10.82□□□□□ -0.68
LIG3-203ENST00000585370 GATMP50440 423 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ZNF135P52742 658 aaPredicted RBP10.82□□□□□ -0.68
LIG3-203ENST00000585370 CDH6P55285 790 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ATP11AP98196 1134 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
LIG3-203ENST00000585370 ADAM15Q13444 863 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms