RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 PCDHGA2Q9Y5H1 932 aa28.46■■■□□ 2.15
SMARCD2-210ENST00000584400 YJEFN3A6XGL0 299 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 E7ENQ6 273 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 STC2O76061 302 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 PAPSS2O95340 614 aaPredicted RBP28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 OPRD1P41143 372 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 MRE11P49959 708 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 KCNMA1Q12791 1236 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 GAS6Q14393 721 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 ANO4Q32M45 955 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 KLHDC7AQ5VTJ3 777 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 NUDT18Q6ZVK8 323 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 BHLHA9Q7RTU4 235 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 ATRIPQ8WXE1 791 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 PHOX2BQ99453 314 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 FBRSL1Q9HCM7 1045 aaKnown RBP28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 ZSCAN32Q9NX65 697 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 WDR35Q9P2L0 1181 aa28.45■■■□□ 2.14
SMARCD2-210ENST00000584400 SLC12A8A0AV02 714 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 HOXC11O43248 304 aaPredicted RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 GREM1O60565 184 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 HOXD11P31277 338 aaPredicted RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 CHKAP35790 457 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 RPL34P49207 117 aaKnown RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 RAPGEF1Q13905 1077 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 DENND1BQ6P3S1 775 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 ALYREFQ86V81 257 aaKnown RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 NDRG1Q92597 394 aaKnown RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 WBP2Q969T9 261 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 PLD4Q96BZ4 506 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 NOX5Q96PH1 765 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 LSM14BQ9BX40 385 aaKnown RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 HBS1LQ9Y450 684 aaKnown RBP28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 DAAM1Q9Y4D1 1078 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 F5P12259 2224 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 MYO16Q9Y6X6 1858 aa28.44■■■□□ 2.14
SMARCD2-210ENST00000584400 CHURC1-FNTBB4DL54 471 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 FOXN3O00409 490 aaPredicted RBP28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 RNF40O75150 1001 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 KRT9P35527 623 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 SNX16P57768 344 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 Q6ZNB5 142 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 XPO6Q96QU8 1125 aaKnown RBP28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 MIS12Q9H081 205 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 PLCB1Q9NQ66 1216 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 PCDHGC3Q9UN70 934 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 CEP83Q9Y592 693 aa28.43■■■□□ 2.14
SMARCD2-210ENST00000584400 PIK3R2O00459 728 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 APODP05090 189 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 UCHL3P15374 230 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 HARS2P49590 506 aaKnown RBP28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 SATB1Q01826 763 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 DRAP1Q14919 205 aaPredicted RBP28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 KLHL40Q2TBA0 621 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 GAB4Q2WGN9 574 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 TSSK4Q6SA08 328 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 TMEM25Q86YD3 366 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 FAM71AQ8IYT1 594 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 EDEM1Q92611 657 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 ACDQ96AP0 544 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 BPIFA3Q9BQP9 254 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 SLC4A5Q9BY07 1137 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 LHX5Q9H2C1 402 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 ACP6Q9NPH0 428 aa28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 LIMA1Q9UHB6 759 aaKnown RBP28.42■■■□□ 2.14
SMARCD2-210ENST00000584400 SMTNL1A8MU46 457 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 LTFP02788 710 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 HMBSP08397 361 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 CORO1AP31146 461 aaKnown RBP28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 GRIA2P42262 883 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 NAIF1Q69YI7 327 aaPredicted RBP28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 TMEM110Q86TL2 294 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 FMNL3Q8IVF7 1028 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 SCUBE3Q8IX30 993 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 NELL1Q92832 810 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 BBS2Q9BXC9 721 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 STK33Q9BYT3 514 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 ARHGEF4Q9NR80 690 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 MARK1Q9P0L2 795 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 DEC1Q9P2X7 70 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 SLC8A2Q9UPR5 921 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 FHOD1Q9Y613 1164 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 R4GN57 208 aa28.41■■■□□ 2.14
SMARCD2-210ENST00000584400 GABBR2O75899 941 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 KAT7O95251 611 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 COPB1P53618 953 aaKnown RBP28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 ANO6Q4KMQ2 910 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 DPY19L2P1Q6NXN4 242 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 ZBTB44Q8NCP5 570 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 PDCL3Q9H2J4 239 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 AJAP1Q9UKB5 411 aaPredicted RBP28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 WDFY4Q6ZS81 3184 aa28.4■■■□□ 2.14
SMARCD2-210ENST00000584400 LRRC10BA6NIK2 292 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 CLCN1P35523 988 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 PDCLQ13371 301 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 TRIP4Q15650 581 aaPredicted RBP28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 MSANTD2Q6P1R3 559 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 TPGS1Q6ZTW0 290 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 BEND5Q7L4P6 421 aa28.39■■■□□ 2.14
SMARCD2-210ENST00000584400 SLC47A2Q86VL8 602 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms