RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 USP8P40818 1118 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 PMF1Q6P1K2 205 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 LONP2Q86WA8 852 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 RNF139Q8WU17 664 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 ACDQ96AP0 544 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 EPC1Q9H2F5 836 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 CNGB3Q9NQW8 809 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 POLR3BQ9NW08 1133 aaPredicted RBP21.41■■□□□ 1.02
SS18-224ENST00000584083 APEX2Q9UBZ4 518 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 RAB23Q9ULC3 237 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 MYO15AQ9UKN7 3530 aa21.41■■□□□ 1.02
SS18-224ENST00000584083 SLC12A8A0AV02 714 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 PES1O00541 588 aaKnown RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 LETM1O95202 739 aaPredicted RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 KAT7O95251 611 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 PON1P27169 355 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 PXNP49023 591 aaPredicted RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 APBA1Q02410 837 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 CT47A1Q5JQC4 288 aaPredicted RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 BSPRYQ5W0U4 402 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 TPGS1Q6ZTW0 290 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 BHLHA9Q7RTU4 235 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 RUBCNQ92622 972 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 TUBGCP2Q9BSJ2 902 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 BBS2Q9BXC9 721 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 DCLK3Q9C098 648 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 OLA1Q9NTK5 396 aaKnown RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 DEC1Q9P2X7 70 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 NCDNQ9UBB6 729 aa21.4■■□□□ 1.02
SS18-224ENST00000584083 SMG5Q9UPR3 1016 aaKnown RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 MYO18AQ92614 2054 aaKnown RBP21.4■■□□□ 1.02
SS18-224ENST00000584083 YJEFN3A6XGL0 299 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 E7ENQ6 273 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 NEDD8-MDP1E9PL57 170 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 MED7O43513 233 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 TULP3O75386 442 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 GRIA2P42262 883 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 DAOAP59103 153 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 MESP2Q0VG99 397 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 DMC1Q14565 340 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 PREPLQ4J6C6 727 aaPredicted RBP21.39■■□□□ 1.01
SS18-224ENST00000584083 VWA3BQ502W6 1294 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 Q6ZNB5 142 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 PRR23BQ6ZRT6 265 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 SYT13Q7L8C5 426 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 WDR5BQ86VZ2 330 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 SFTPA1Q8IWL2 248 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 USP33Q8TEY7 942 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 EDEM1Q92611 657 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 HHIPQ96QV1 700 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 NDST4Q9H3R1 872 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 SAMSN1Q9NSI8 373 aaKnown RBP21.39■■□□□ 1.01
SS18-224ENST00000584083 WDR35Q9P2L0 1181 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 ZNF510Q9Y2H8 683 aa21.39■■□□□ 1.01
SS18-224ENST00000584083 EP300Q09472 2414 aaPredicted RBP21.39■■□□□ 1.01
SS18-224ENST00000584083 TBC1D3BA6NDS4 549 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 KCNJ18B7U540 433 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 THAP12O43422 761 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 HRO43593 1189 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 GABBR2O75899 941 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 KLKB1P03952 638 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 TYRP14679 529 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 GNA15P30679 374 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 CORO1AP31146 461 aaKnown RBP21.38■■□□□ 1.01
SS18-224ENST00000584083 CNR2P34972 360 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 SRSF5Q13243 272 aaKnown RBP21.38■■□□□ 1.01
SS18-224ENST00000584083 SIM2Q14190 667 aaPredicted RBP21.38■■□□□ 1.01
SS18-224ENST00000584083 KCNJ12Q14500 433 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 LPAL2Q16609 132 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 ETFBKMTQ8IXQ9 262 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 SCML4Q8N228 414 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 CCDC33Q8N5R6 958 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 CAMKK1Q8N5S9 505 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 HSFY1Q96LI6 401 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 XPO6Q96QU8 1125 aaKnown RBP21.38■■□□□ 1.01
SS18-224ENST00000584083 MIS12Q9H081 205 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 ST7Q9NRC1 585 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 ABCC13Q9NSE7 274 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 DNAJC17Q9NVM6 304 aaKnown RBP21.38■■□□□ 1.01
SS18-224ENST00000584083 WDR87Q6ZQQ6 2873 aa21.38■■□□□ 1.01
SS18-224ENST00000584083 ANTXRLA6NF34 631 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 TIE1P35590 1138 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 TNFRSF4P43489 277 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 MRPS21P82921 87 aaKnown RBP21.37■■□□□ 1.01
SS18-224ENST00000584083 DENND1BQ6P3S1 775 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 SASS6Q6UVJ0 657 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 NUDT18Q6ZVK8 323 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 CEP68Q76N32 757 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 DENND1CQ8IV53 801 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 FMNL3Q8IVF7 1028 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 DCLK2Q8N568 766 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 ZNF606Q8WXB4 792 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 IRGQQ8WZA9 623 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 GOLGA1Q92805 767 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 BHMTQ93088 406 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 ACP6Q9NPH0 428 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 SFMBT1Q9UHJ3 866 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 NFE2L3Q9Y4A8 694 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 OTOGLQ3ZCN5 2332 aa21.37■■□□□ 1.01
SS18-224ENST00000584083 A0A0A0MRY4 1105 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms