RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CLIC2O15247 247 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 HYAL3O43820 417 aaPredicted RBP21.65■■□□□ 1.06
SRSF1-206ENST00000583741 TULP3O75386 442 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 FAM163BP0C2L3 166 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 TPM4P67936 248 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 GAD2Q05329 585 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 SPDYCQ5MJ68 293 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 PIP4P1Q86T03 277 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 NELFCDQ8IXH7 590 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 ZNF513Q8N8E2 541 aaPredicted RBP21.65■■□□□ 1.06
SRSF1-206ENST00000583741 PDZD8Q8NEN9 1154 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 ZNF507Q8TCN5 953 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 OVCA2Q8WZ82 227 aa21.65■■□□□ 1.06
SRSF1-206ENST00000583741 TBC1D3BA6NDS4 549 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 TMEM8BA6NDV4 472 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 HOXC11O43248 304 aaPredicted RBP21.64■■□□□ 1.06
SRSF1-206ENST00000583741 RTN3O95197 1032 aaPredicted RBP21.64■■□□□ 1.06
SRSF1-206ENST00000583741 STAU1O95793 577 aaKnown RBP21.64■■□□□ 1.06
SRSF1-206ENST00000583741 CFIP05156 583 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 GABRG2P18507 467 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 PMS1P54277 932 aaKnown RBP21.64■■□□□ 1.06
SRSF1-206ENST00000583741 HECTD3Q5T447 861 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 PAQR9Q6ZVX9 377 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 MIB1Q86YT6 1006 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 DEFB119Q8N690 84 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 OTUB2Q96DC9 234 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 SMYD3Q9H7B4 428 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 NFE2L3Q9Y4A8 694 aa21.64■■□□□ 1.06
SRSF1-206ENST00000583741 MYH10P35580 1976 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SRRM3A6NNA2 597 aaPredicted RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 HOXB3P14651 431 aaPredicted RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SLC5A3P53794 718 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 RPL6Q02878 288 aaKnown RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 LRRC63Q05C16 580 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SEMA3BQ13214 749 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 BYSLQ13895 437 aaKnown RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 TPD52L1Q16890 204 aaPredicted RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 KNOP1Q1ED39 458 aaKnown RBP21.64■■□□□ 1.05
SRSF1-206ENST00000583741 C10orf76Q5T2E6 689 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SNX30Q5VWJ9 437 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 TTI2Q6NXR4 508 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 FAM35AQ86V20 835 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 TMEM25Q86YD3 366 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 TERB1Q8NA31 727 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 XXYLT1Q8NBI6 393 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 TSG101Q99816 390 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SLC32A1Q9H598 525 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SPHK2Q9NRA0 654 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 GMIPQ9P107 970 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 CALCOCO1Q9P1Z2 691 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 DEC1Q9P2X7 70 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 SH3BP1Q9Y3L3 701 aa21.64■■□□□ 1.05
SRSF1-206ENST00000583741 ZDHHC11BP0C7U3 371 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 HOXD12P35452 270 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 WASP42768 502 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 CASP4P49662 377 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 PGFP49763 221 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 CDH8P55286 799 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 TRPC3Q13507 836 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 BTBD8Q5XKL5 378 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 ANKRD40Q6AI12 368 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 ZCCHC14Q8WYQ9 949 aaKnown RBP21.63■■□□□ 1.05
SRSF1-206ENST00000583741 ELMO3Q96BJ8 720 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 KCTD10Q9H3F6 313 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 IL37Q9NZH6 218 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 KLK13Q9UKR3 277 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 NEUROG3Q9Y4Z2 214 aa21.63■■□□□ 1.05
SRSF1-206ENST00000583741 CELSR3Q9NYQ7 3312 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 A0A1W2PQF6 199 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 AP5Z1O43299 807 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 IRF1P10914 325 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 DPP6P42658 865 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 TUBP50607 506 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 SIM1P81133 766 aaPredicted RBP21.62■■□□□ 1.05
SRSF1-206ENST00000583741 ANO4Q32M45 955 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 ZCWPW2Q504Y3 356 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 FOXR2Q6PJQ5 311 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 PLEKHO2Q8TD55 490 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 KCNV2Q8TDN2 545 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 DUSP9Q99956 384 aaKnown RBP21.62■■□□□ 1.05
SRSF1-206ENST00000583741 GTPBP2Q9BX10 602 aaKnown RBP21.62■■□□□ 1.05
SRSF1-206ENST00000583741 CAPN10Q9HC96 672 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 DMAP1Q9NPF5 467 aaPredicted RBP21.62■■□□□ 1.05
SRSF1-206ENST00000583741 FANCLQ9NW38 375 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 SLC6A14Q9UN76 642 aa21.62■■□□□ 1.05
SRSF1-206ENST00000583741 FAM92AA1XBS5 289 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 UPK3BL1B0FP48 263 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 UPK3BL2E5RIL1 263 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 HOXB2P14652 356 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 ATICP31939 592 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 FAM193AP78312 1265 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 DUOXA1Q1HG43 343 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 EGFLAMQ63HQ2 1017 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 TRMT11Q7Z4G4 463 aaKnown RBP21.61■■□□□ 1.05
SRSF1-206ENST00000583741 OR2I1PQ8NGU4 316 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 ERLEC1Q96DZ1 483 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 ACOX2Q99424 681 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 MED10Q9BTT4 135 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 SDCBP2Q9H190 292 aa21.61■■□□□ 1.05
SRSF1-206ENST00000583741 CD248Q9HCU0 757 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms