RNA–Protein interactions for RNA: ENST00000581523.5

MSI2-213, Transcript of musashi RNA binding protein 2, human

TSL 2

Gene MSI2, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-213	ENST00000581523	RNF41	Q9H4P4	317 aa	Predicted RBP	4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	KAT14	Q9H8E8	782 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	SLC28A3	Q9HAS3	691 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	VAT1L	Q9HCJ6	419 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	LMBRD1	Q9NUN5	540 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	RAPGEFL1	Q9UHV5	662 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	MTUS1	Q9ULD2	1270 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	TPCN1	Q9ULQ1	816 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	SLC4A7	Q9Y6M7	1214 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	SI	P14410	1827 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	ABCB11	O95342	1321 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	WDR19	Q8NEZ3	1342 aa		4.92	□□□□□ -1.62
MSI2-213	ENST00000581523	TCF20	Q9UGU0	1960 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	MUC3A	Q02505	3323 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523		H3BUI4	141 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PHGDH	O43175	533 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TCEA3	O75764	348 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	AMY1A	P04745	511 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	MMP3	P08254	477 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PARP1	P09874	1014 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	SNHG28	P0DPA3	235 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	MYCL	P12524	364 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TYR	P14679	529 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	JUNB	P17275	347 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	CRHR1	P34998	444 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	SREBF1	P36956	1147 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PRIM2	P49643	509 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	KCNQ1	P51787	676 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	EPHB3	P54753	998 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	DEFB103A	P81534	67 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	NUCB1	Q02818	461 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TLE1	Q04724	770 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	BTK	Q06187	659 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ARHGAP1	Q07960	439 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	IMMT	Q16891	758 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ASPRV1	Q53RT3	343 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	GPATCH4	Q5T3I0	446 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ARHGEF16	Q5VV41	709 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TRMT10B	Q6PF06	316 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	CYB5R4	Q7L1T6	521 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	RSPH3	Q86UC2	560 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	IQCA1	Q86XH1	822 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	RAB11FIP4	Q86YS3	637 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ADGRF4	Q8IZF3	695 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PQLC1	Q8N2U9	271 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	IL31RA	Q8NI17	732 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	GDPD5	Q8WTR4	605 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ARNTL2	Q8WYA1	636 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	FAM168A	Q92567	244 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	SLC35A4	Q96G79	324 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	NT5C1B	Q96P26	610 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PDCD2L	Q9BRP1	358 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	NSUN3	Q9H649	340 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	ZMAT3	Q9HA38	289 aa	Known RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	GCM1	Q9NP62	436 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TCP11L1	Q9NUJ3	509 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PNPO	Q9NVS9	261 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	FAM53C	Q9NYF3	392 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TRPS1	Q9UHF7	1281 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	PCDHA3	Q9Y5H8	950 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	MYH7B	A7E2Y1	1941 aa		4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	TRIP12	Q14669	1992 aa	Predicted RBP	4.91	□□□□□ -1.62
MSI2-213	ENST00000581523	MICAL3	Q7RTP6	2002 aa		4.9	□□□□□ -1.62
MSI2-213	ENST00000581523	NLRC5	Q86WI3	1866 aa		4.9	□□□□□ -1.62
MSI2-213	ENST00000581523	ATG2A	Q2TAZ0	1938 aa		4.9	□□□□□ -1.62
MSI2-213	ENST00000581523	RHPN2P1	A8MT19	583 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	MYO1F	O00160	1098 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	FOXN3	O00409	490 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	ALDH1A2	O94788	518 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	GH1	P01241	217 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	IQCF3	P0C7M6	154 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	FTH1P19	P0C7X4	201 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	ACTN1	P12814	892 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	ZNF28	P17035	718 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	MAL	P21145	153 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	CASP5	P51878	434 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	PER3	P56645	1201 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	SP4	Q02446	784 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	STK3	Q13188	491 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	SMAD4	Q13485	552 aa	Known RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	PTGIS	Q16647	500 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	TCTN1	Q2MV58	587 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	INO80D	Q53TQ3	878 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	PRR23B	Q6ZRT6	265 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	LRRC8D	Q7L1W4	858 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	PLA2G15	Q8NCC3	412 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	DNER	Q8NFT8	737 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	CCHCR1	Q8TD31	782 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	UBE2Q2	Q8WVN8	375 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	LPP	Q93052	612 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	RIPOR3	Q96MK2	946 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	DIRC2	Q96SL1	478 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	UHRF1	Q96T88	793 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	RMDN3	Q96TC7	470 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	VRK1	Q99986	396 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	RWDD1	Q9H446	243 aa	Predicted RBP	4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	JMJD4	Q9H9V9	463 aa		4.9	□□□□□ -1.63
MSI2-213	ENST00000581523	PPCS	Q9HAB8	311 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms