RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 TOGARAM2Q6ZUX3 1019 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 SCD5Q86SK9 330 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 DEFB119Q8N690 84 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 IPO4Q8TEX9 1081 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF419Q96HQ0 510 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 BBS2Q9BXC9 721 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 ADAM33Q9BZ11 813 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 NACA2Q9H009 215 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 APOBEC3GQ9HC16 384 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 FAM49BQ9NUQ9 324 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 DNAJC17Q9NVM6 304 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 RALYQ9UKM9 306 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC6A14Q9UN76 642 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 CACNA1EQ15878 2313 aa11.24□□□□□ -0.61
CSNK1D-210ENST00000579308 A0A1W2PQH9 124 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 NEDD8-MDP1E9PL57 170 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 GFRA2O00451 464 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 MAPK13O15264 365 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF217O75362 1048 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 F13A1P00488 732 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 HLA-DRAP01903 254 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 RARGP13631 454 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 NDUFV2P19404 249 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 PLA2G4AP47712 749 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 KIF11P52732 1056 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 ZNF33AQ06730 810 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 TPGS1Q6ZTW0 290 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC41A1Q8IVJ1 513 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 CEP57L1Q8IYX8 460 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 CYFIP2Q96F07 1278 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 MRGPRX1Q96LB2 322 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 XPO6Q96QU8 1125 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC32A1Q9H598 525 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 EXOC1Q9NV70 894 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 CFAP45Q9UL16 551 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 TRAF3IP3Q9Y228 551 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 PCDHA5Q9Y5H7 936 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 USP3Q9Y6I4 520 aa11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 HELZP42694 1942 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-210ENST00000579308 SPAARA0A1B0GVQ0 90 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 FAM221BA6H8Z2 402 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 TMEM8BA6NDV4 472 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 WASH3PC4AMC7 463 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 ARHGAP33O14559 1287 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 MDM4O15151 490 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CACNA1GO43497 2377 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CILPO75339 1184 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 STC2O76061 302 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 PENKP01210 267 aaPredicted RBP11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 KLKB1P03952 638 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CFIP05156 583 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 MYL1P05976 194 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CD59P13987 128 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 ACO1P21399 889 aaKnown RBP11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CMA1P23946 247 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 ADORA2BP29275 332 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 VAMP7P51809 220 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 DNM1Q05193 864 aaKnown RBP11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 GFPT1Q06210 699 aaPredicted RBP11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 ENPEPQ07075 957 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 PPP3CAQ08209 521 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 PKP1Q13835 747 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 NFIL3Q16649 462 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 FREM2Q5SZK8 3169 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 SDE2Q6IQ49 451 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 THADAQ6YHU6 1953 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CCDC186Q7Z3E2 898 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CHPFQ8IZ52 775 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 TRIML1Q8N9V2 468 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 NT5C1AQ9BXI3 368 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■■□ 22.1
CSNK1D-210ENST00000579308 DNAAF2Q9NVR5 837 aaKnown RBP11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 MYOFQ9NZM1 2061 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 NUDT5Q9UKK9 219 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 CYP8B1Q9UNU6 501 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 HPSEQ9Y251 543 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 FRMD4BQ9Y2L6 1034 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 SLC27A6Q9Y2P4 619 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 NEUROG3Q9Y4Z2 214 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 ZFYVE26Q68DK2 2539 aa11.22□□□□□ -0.61
CSNK1D-210ENST00000579308 PCNX2A6NKB5 2137 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 NUP205Q92621 2012 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 A0A1W2PQD8 194 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 GJB3O75712 270 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 CAPNS1P04632 268 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 DGKGP49619 791 aa11.21□□□□□ -0.61
CSNK1D-210ENST00000579308 FAM193AP78312 1265 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms