RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 SYAP1Q96A49 352 aaPredicted RBP4.06□□□□□ -1.76
NUP85-209ENST00000578987 CYFIP2Q96F07 1278 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 SMARCD1Q96GM5 515 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 SPACA7Q96KW9 195 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 ZNF396Q96N95 335 aaPredicted RBP4.06□□□□□ -1.76
NUP85-209ENST00000578987 TWNKQ96RR1 684 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 BBS2Q9BXC9 721 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 ADAM33Q9BZ11 813 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 LRRC27Q9C0I9 530 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 ELOVL4Q9GZR5 314 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 NACA2Q9H009 215 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 KCTD10Q9H3F6 313 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 NMUR1Q9HB89 426 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 DNAJC17Q9NVM6 304 aaKnown RBP4.06□□□□□ -1.76
NUP85-209ENST00000578987 DMAC2Q9NW81 257 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 CACNA2D2Q9NY47 1150 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 IL37Q9NZH6 218 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 EHD2Q9NZN4 543 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 TBC1D14Q9P2M4 693 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 DEC1Q9P2X7 70 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 KLK13Q9UKR3 277 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 SLC6A14Q9UN76 642 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 WASF3Q9UPY6 502 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 MAPK8IP1Q9UQF2 711 aa4.06□□□□□ -1.76
NUP85-209ENST00000578987 NYNRINQ9P2P1 1898 aaKnown RBP4.06□□□□□ -1.76
NUP85-209ENST00000578987 GOLGA4Q13439 2230 aaKnown RBP4.06□□□□□ -1.76
NUP85-209ENST00000578987 ATP8B3O60423 1300 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PVALEFA0A1B0GWK0 134 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GOLGA8CPA6NN73 597 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SRRM3A6NNA2 597 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 KCNJ18B7U540 433 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TAF4O00268 1085 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 KCNK3O14649 394 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CYP26A1O43174 497 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 HOXC11O43248 304 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 AP5Z1O43299 807 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GREM1O60565 184 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TSPAN3O60637 253 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 NDUFS2O75306 463 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 STC2O76061 302 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 YEATS4O95619 227 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 KLKB1P03952 638 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SERPINF2P08697 491 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 ZDHHC11BP0C7U3 371 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TRIM49P0CI25 452 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TRIM49CP0CI26 452 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 ZSCAN22P10073 491 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 CD59P13987 128 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CD58P19256 250 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 NDUFV2P19404 249 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CSRP1P21291 193 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 EIF2DP41214 584 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 PIK3CAP42336 1068 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PLA2G4AP47712 749 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 ME1P48163 572 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GCLMP48507 274 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 VAMP7P51809 220 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 ATXN3P54252 364 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 SNRPFP62306 86 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 NUCB2P80303 420 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PPP3CAQ08209 521 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 LMAN2Q12907 356 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SEMA3BQ13214 749 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 COL9A2Q14055 689 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 DSG2Q14126 1118 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GEN1Q17RS7 908 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 BMT2Q1RMZ1 405 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SGSM1Q2NKQ1 1148 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TSR1Q2NL82 804 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 PLEKHG6Q3KR16 790 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 ZACNQ401N2 412 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 C10orf120Q5SQS8 335 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PPP1R26Q5T8A7 1209 aaPredicted RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 SNX30Q5VWJ9 437 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 RESP18Q5W5W9 173 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GRAMD4Q6IC98 578 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SDE2Q6IQ49 451 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CNNM4Q6P4Q7 775 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 C19orf48Q6RUI8 117 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 KIAA1324Q6UXG2 1013 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 SLC36A4Q6YBV0 504 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CLEC20AQ6ZU45 233 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 SCD5Q86SK9 330 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PIP4P1Q86T03 277 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 FAM124AQ86V42 546 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 C11orf74Q86VG3 221 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 DDX42Q86XP3 938 aaKnown RBP eCLIP4.05□□□□□ -1.76
NUP85-209ENST00000578987 CACUL1Q86Y37 369 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CEP57L1Q8IYX8 460 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CHPFQ8IZ52 775 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 CRYBG2Q8N1P7 616 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 HDDC3Q8N4P3 179 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TRIML1Q8N9V2 468 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 TERB1Q8NA31 727 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 KIAA0895Q8NCT3 520 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 PDZD8Q8NEN9 1154 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 IPO4Q8TEX9 1081 aaKnown RBP4.05□□□□□ -1.76
NUP85-209ENST00000578987 SORCS1Q8WY21 1168 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 OVCA2Q8WZ82 227 aa4.05□□□□□ -1.76
NUP85-209ENST00000578987 GATA6Q92908 595 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms