RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 LAD1O00515 517 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 TSPAN3O60637 253 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 USP12O75317 370 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
GGA3-206ENST00000578773 CTDNEP1O95476 244 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 IGHV4-34P06331 123 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 ABCB4P21439 1286 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 LMO2P25791 158 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 EPHA8P29322 1005 aaPredicted RBP11.77□□□□□ -0.53
GGA3-206ENST00000578773 OXTRP30559 389 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 KRT2P35908 639 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 PDE6CP51160 858 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 SKOR1P84550 965 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 GEN1Q17RS7 908 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 C1orf186Q6ZWK4 172 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
GGA3-206ENST00000578773 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
GGA3-206ENST00000578773 KIAA1958Q8N8K9 716 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 PRCCQ92733 491 aaPredicted RBP11.77□□□□□ -0.53
GGA3-206ENST00000578773 SPATA17Q96L03 361 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 BBS2Q9BXC9 721 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 DPH1Q9BZG8 443 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 OSGEPQ9NPF4 335 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 NME7Q9Y5B8 376 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 MED13Q9UHV7 2174 aa11.77□□□□□ -0.53
GGA3-206ENST00000578773 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 F8VP50 259 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 GFRA2O00451 464 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 PFKLP17858 780 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 MAGEA11P43364 429 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 DGKGP49619 791 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ST3GAL1Q11201 340 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 CLN3Q13286 438 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ENPP2Q13822 863 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 STARD3Q14849 445 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ZSCAN23Q3MJ62 389 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 SV2CQ496J9 727 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 SFMBT2Q5VUG0 894 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 CDCP2Q5VXM1 449 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 FAM171BQ6P995 826 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 CCDC81Q6ZN84 652 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 NTPCRQ9BSD7 190 aaKnown RBP11.76□□□□□ -0.53
GGA3-206ENST00000578773 EPN3Q9H201 632 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ADAMTS1Q9UHI8 967 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 SH3BP1Q9Y3L3 701 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
GGA3-206ENST00000578773 PTPRJQ12913 1337 aa11.76□□□□□ -0.53
GGA3-206ENST00000578773 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 A0A0B4J269 797 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ANKRD63C9JTQ0 380 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 VILLO15195 856 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 SEMA4FO95754 770 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ACADMP11310 421 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 CDK4P11802 303 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
GGA3-206ENST00000578773 CKMT2P17540 419 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 CD27P26842 260 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 CDC25AP30304 524 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 POLR2BP30876 1174 aaKnown RBP11.75□□□□□ -0.53
GGA3-206ENST00000578773 LIG4P49917 911 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ERVPABLB-1P60509 514 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ORC1Q13415 861 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ZNF234Q14588 700 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ARL13BQ3SXY8 428 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 C3orf38Q5JPI3 329 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
GGA3-206ENST00000578773 PTRH1Q86Y79 214 aaKnown RBP11.75□□□□□ -0.53
GGA3-206ENST00000578773 CACTIN-AS1Q8N1I8 211 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 OTUB2Q96DC9 234 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 MSTO1Q9BUK6 570 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 THAP10Q9P2Z0 257 aaPredicted RBP11.75□□□□□ -0.53
GGA3-206ENST00000578773 SATB2Q9UPW6 733 aa11.75□□□□□ -0.53
GGA3-206ENST00000578773 TRIM38O00635 465 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 CASC3O15234 703 aaKnown RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 SDC3O75056 442 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 CSO75390 466 aaKnown RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 PLS3P13797 630 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 ACO1P21399 889 aaKnown RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 PAX3P23760 479 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 ACP1P24666 158 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 LSSP48449 732 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 RIPPLY3P57055 190 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 C21orf59P57076 290 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 MYL7Q01449 175 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 CYP27A1Q02318 531 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 ZNF174Q15697 407 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 NUDT18Q6ZVK8 323 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 RBBP8NLQ8NC74 664 aaPredicted RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 CXorf38Q8TB03 319 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 KBTBD7Q8WVZ9 684 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 PRR11Q96HE9 360 aaPredicted RBP11.74□□□□□ -0.53
GGA3-206ENST00000578773 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
GGA3-206ENST00000578773 SYT15Q9BQS2 421 aa11.74□□□□□ -0.53
GGA3-206ENST00000578773 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms