RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 KLHL3Q9UH77 587 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 RUVBL2Q9Y230 463 aaKnown RBP11.05□□□□□ -0.64
SEC22B-201ENST00000578049 ARIH2O95376 493 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 FGFR2P21802 821 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 SLC1A6P48664 564 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 C21orf59P57076 290 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 SLFN11Q7Z7L1 901 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 KRT73Q86Y46 540 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 DHRSXQ8N5I4 330 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 USP33Q8TEY7 942 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 WDR60Q8WVS4 1066 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 APOL4Q9BPW4 351 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 TMEM121Q9BTD3 319 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 KRCC1Q9NPI7 259 aaPredicted RBP11.05□□□□□ -0.64
SEC22B-201ENST00000578049 CNGB3Q9NQW8 809 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 TBC1D13Q9NVG8 400 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 APOC4-APOC2K7ER74 178 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 C21orf2O43822 256 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 APOC2P02655 101 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 CHRM3P20309 590 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 MSH3P20585 1137 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 PRIM2P49643 509 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
SEC22B-201ENST00000578049 HPCAP84074 193 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 CDH17Q12864 832 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 PDK4Q16654 411 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 EPC2Q52LR7 807 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 MPZL3Q6UWV2 235 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 MARK2Q7KZI7 788 aaKnown RBP11.05□□□□□ -0.64
SEC22B-201ENST00000578049 STKLD1Q8NE28 680 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 TAS1R2Q8TE23 839 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 IL1RL2Q9HB29 575 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 DYRK4Q9NR20 520 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 FAM49BQ9NUQ9 324 aa11.05□□□□□ -0.64
SEC22B-201ENST00000578049 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
SEC22B-201ENST00000578049 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 PHGDHO43175 533 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ASNA1O43681 348 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ELK3P41970 407 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SERPINH1P50454 418 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 NCKAP1LP55160 1127 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SCARA3Q6AZY7 606 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CBWD1Q9BRT8 395 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SHCBP1LQ9BZQ2 653 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 WWOXQ9NZC7 414 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 UBA2Q9UBT2 640 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SSTR3P32745 418 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 IFI35P80217 286 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CCDC142Q17RM4 750 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 FNIP1Q8TF40 1166 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 RORBQ92753 470 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 AP4E1Q9UPM8 1137 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 E9PBE3 544 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 F8W810 466 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CD3EAPO15446 510 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 GRAP2O75791 330 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 OCM2P0CE71 109 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 OCMP0CE72 109 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 PAX7P23759 505 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 TALDO1P37837 337 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ATXN3P54252 364 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 PTPN11Q06124 597 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 LRRC74AQ0VAA2 488 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 AADATQ8N5Z0 425 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 RFWD2Q8NHY2 731 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SLC5A5Q92911 643 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SYNPO2Q9UMS6 1093 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 NCANO14594 1321 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 FAM205AQ6ZU69 1335 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 PAEPP09466 180 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CHN2P52757 468 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 AGKQ53H12 422 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ZNF484Q5JVG2 852 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 N4BP2L1Q5TBK1 243 aaPredicted RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CYP4A22Q5TCH4 519 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CYP4Z1Q86W10 505 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 SNX31Q8N9S9 440 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 C8orf4Q9NR00 106 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 RNF112Q9ULX5 631 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 FRMPD4Q14CM0 1322 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 PRR23AA6NEV1 266 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ATP4AP20648 1035 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 CNTN1Q12860 1018 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 AUHQ13825 339 aaKnown RBP11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ARHGEF7Q14155 803 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 C16orf72Q14CZ0 275 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 TTC23Q5W5X9 447 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 HDDC2Q7Z4H3 204 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 EXOC3L1Q86VI1 746 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 NT5DC4Q86YG4 428 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 LZTR1Q8N653 840 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 FAM172AQ8WUF8 416 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 KCTD10Q9H3F6 313 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
SEC22B-201ENST00000578049 ZNRF3Q9ULT6 936 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms