RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 MTA2O94776 668 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 GEMP55040 296 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 NR1H2P55055 460 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 DLG4P78352 724 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 PTP4A2Q12974 167 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ZNF235Q14590 738 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SPANXN3Q5MJ09 141 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 C6orf10Q5SRN2 563 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 BRSK2Q8IWQ3 736 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 MAGED4Q96JG8 741 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 GORASP1Q9BQQ3 440 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 C6orf203Q9P0P8 240 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 EFR3BQ9Y2G0 817 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 E2F8A0AVK6 867 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SPDYE2BA6NHP3 402 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 HACD1B0YJ81 288 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 DDHD2O94830 711 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ZSCAN5DPP0CG00 497 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SPDYE6P0CI01 402 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 BST1Q10588 318 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 TCHHL1Q5QJ38 904 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 C3orf67Q6ZVT6 689 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 POU5F2Q8N7G0 328 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 TMEM59LQ9UK28 342 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 RUVBL2Q9Y230 463 aaKnown RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 FAM237BA0A1B0GVD1 139 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 DYTNA2CJ06 578 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 TXNP10599 105 aaKnown RBP10.68□□□□□ -0.7
PTPRM-205ENST00000577827 NFKBIAP25963 317 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 BAG6P46379 1132 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 NCKAP1LP55160 1127 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 PDK3Q15120 406 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SV2CQ496J9 727 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ERO1BQ86YB8 467 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ABI1Q8IZP0 508 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 SHCBP1Q8NEM2 672 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 FAM81AQ8TBF8 368 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 IDI2Q9BXS1 227 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 RUBCNLQ9H714 662 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 ANKRD6Q9Y2G4 727 aa10.68□□□□□ -0.7
PTPRM-205ENST00000577827 TMEM247A6NEH6 219 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 DDTLA6NHG4 134 aaPredicted RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SIGLEC16A6NMB1 481 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 UBDO15205 165 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 DCXO43602 365 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MAGEC1O60732 1142 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 F9P00740 461 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 GLRA2P23416 452 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CYP2F1P24903 491 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 FASP25445 335 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 RHBDL3P58872 404 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CWF19L1Q69YN2 538 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 C6orf89Q6UWU4 347 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 PYDC1Q8WXC3 89 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 EGFL8Q99944 293 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 TRIM54Q9BYV2 358 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 EPS8L2Q9H6S3 715 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SATB2Q9UPW6 733 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 F8VP50 259 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 TCEA3O75764 348 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 RPL22P35268 128 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 PTGIRP43119 386 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ALDH1A3P47895 512 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ECM1Q16610 540 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CYP1B1Q16678 543 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SLC22A9Q8IVM8 553 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ULK2Q8IYT8 1036 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 COLGALT1Q8NBJ5 622 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 IPMKQ8NFU5 416 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MRPS26Q9BYN8 205 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 COPG2Q9UBF2 871 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SPATA31A7Q8IWB4 1347 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 hCG_1818297A0A087WSY0 165 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MEI4A8MW99 385 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ACAT1P24752 427 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MIPP30301 263 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CLK1P49759 484 aaKnown RBP10.67□□□□□ -0.7
PTPRM-205ENST00000577827 HK2P52789 917 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 BCAT1P54687 386 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 VPS72Q15906 364 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 EMC10Q5UCC4 262 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 CDC26Q8NHZ8 85 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 SNX19Q92543 992 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MMP19Q99542 508 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 EBF2Q9HAK2 575 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 PALMDQ9NP74 551 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 PXMP2Q9NR77 195 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 GGA3Q9NZ52 723 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 ZNRF3Q9ULT6 936 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 UMODL1Q5DID0 1318 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MRC1P22897 1456 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 TPST1O60507 370 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 MYO1DO94832 1006 aa10.67□□□□□ -0.7
PTPRM-205ENST00000577827 IFNA8P32881 189 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms