RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 CITED4Q96RK1 184 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 ACBD6Q9BR61 282 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 PYM1Q9BRP8 204 aaKnown RBP9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 RUSC1Q9BVN2 902 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 RAB34Q9BZG1 259 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 BRD7Q9NPI1 651 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 ARHGEF4Q9NR80 690 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 TMLHEQ9NVH6 421 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 KCND2Q9NZV8 630 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 CALCOCO1Q9P1Z2 691 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 LRWD1Q9UFC0 647 aa9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
TOM1L1-223ENST00000576932 A0A0B4J269 797 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 A0A1B0GTW7 788 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 C2orf78A6NCI8 922 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 KPNA7A9QM74 516 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 FLRT2O43155 660 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 CER1O95813 267 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 OLFM2O95897 454 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 SCNN1AP37088 669 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 PNPLA4P41247 253 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 EIF1AXP47813 144 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 PPP3CCP48454 512 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 LIG4P49917 911 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 NCKAP1LP55160 1127 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 ZXDBP98169 803 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 EHHADHQ08426 723 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 MESP2Q0VG99 397 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 TRIM29Q14134 588 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 SMAD1Q15797 465 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 SV2CQ496J9 727 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 ZC2HC1CQ53FD0 456 aaPredicted RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 EMC10Q5UCC4 262 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 FILIP1Q7Z7B0 1213 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 SFTPA1Q8IWL2 248 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 VWA5B2Q8N398 1253 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 ZNF513Q8N8E2 541 aaPredicted RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 IGSF22Q8N9C0 903 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 SNX29Q8TEQ0 813 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 DNASE2BQ8WZ79 361 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 GTPBP3Q969Y2 492 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 OTUB2Q96DC9 234 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 BICD1Q96G01 975 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 PNMA5Q96PV4 448 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 PKMYT1Q99640 499 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 DUSP9Q99956 384 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 CD248Q9HCU0 757 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 EHD2Q9NZN4 543 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 LARSQ9P2J5 1176 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 TBC1D14Q9P2M4 693 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 STARD13Q9Y3M8 1113 aa9.87□□□□□ -0.83
TOM1L1-223ENST00000576932 COL6A6A6NMZ7 2263 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TCHHQ07283 1943 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TEX51A0A1B0GUA7 166 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 E9PMD0 336 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TERTO14746 1132 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 HNRNPDLO14979 420 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 ADH5P11766 374 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 HOXB2P14652 356 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 CYP2F1P24903 491 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 NTSR1P30989 418 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 ABCD1P33897 745 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 MAGEA11P43364 429 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 SLC6A11P48066 632 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TRAPPC10P48553 1259 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 ATP2C1P98194 919 aaPredicted RBP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 SDHAF4Q5VUM1 108 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 LARP1BQ659C4 914 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 RHBDF2Q6PJF5 856 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 C12orf40Q86WS4 652 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 DDX42Q86XP3 938 aaKnown RBP eCLIP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 NT5DC4Q86YG4 428 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 ETFBKMTQ8IXQ9 262 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 RGL4Q8IZJ4 473 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TMEM86AQ8N2M4 240 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 DEFB119Q8N690 84 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 STKLD1Q8NE28 680 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 PIP4K2CQ8TBX8 421 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 SETD7Q8WTS6 366 aaKnown RBP9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 SPATA17Q96L03 361 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 ZNF560Q96MR9 790 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 TM7SF3Q9NS93 570 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 DPP3Q9NY33 737 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 MARK1Q9P0L2 795 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 HECTD1Q9ULT8 2610 aa9.86□□□□□ -0.83
TOM1L1-223ENST00000576932 A0A1W2PQF6 199 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 TBC1D3BA6NDS4 549 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 H3BM21 787 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 HOXC11O43248 304 aaPredicted RBP9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 NDUFS2O75306 463 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 NEFLP07196 543 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 HLA-EP13747 358 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 MZF1P28698 734 aaPredicted RBP9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 MATKP42679 507 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 CDR1P51861 262 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 MYL7Q01449 175 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 GAD2Q05329 585 aa9.85□□□□□ -0.83
TOM1L1-223ENST00000576932 TYRO3Q06418 890 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms