RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 FYNP06241 537 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 ADH5P11766 374 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 EEF1GP26641 437 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 GNA15P30679 374 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 PSEN1P49768 467 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC8A3P57103 927 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 NR1H3Q13133 447 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 LRRC32Q14392 662 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 DRAP1Q14919 205 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 STILQ15468 1287 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 STX1AQ16623 288 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 EMC10Q5UCC4 262 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 BTBD8Q5XKL5 378 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 MAMSTRQ6ZN01 415 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 TPGS1Q6ZTW0 290 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 ENOSF1Q7L5Y1 443 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 APTXQ7Z2E3 356 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC47A2Q86VL8 602 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SCML4Q8N228 414 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 PHTF2Q8N3S3 785 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SPEM1Q8N4L4 309 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 NELL1Q92832 810 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 HSFY1Q96LI6 401 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 LSM14BQ9BX40 385 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 NAA15Q9BXJ9 866 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 CNGB3Q9NQW8 809 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 SPHK2Q9NRA0 654 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 TBC1D14Q9P2M4 693 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 FBXO4Q9UKT5 387 aa10.73□□□□□ -0.69
GTF3C1-213ENST00000571886 EML5Q05BV3 1969 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 FAM170AA1A519 330 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ZNF18P17022 549 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 DRD1P21728 446 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 CXCL12P48061 93 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 COPB1P53618 953 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 SEC13P55735 322 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 AMPD2Q01433 879 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ANO4Q32M45 955 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 PASD1Q8IV76 773 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ETFBKMTQ8IXQ9 262 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 FAM71AQ8IYT1 594 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 SIX6OS1Q8N1H7 587 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ARHGAP18Q8N392 663 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 AOPEPQ8N6M6 819 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 PIWIL1Q96J94 861 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 FUCA2Q9BTY2 467 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 SLC4A5Q9BY07 1137 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 GANQ9H2C0 597 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ZDHHC4Q9NPG8 344 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 PLCB1Q9NQ66 1216 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 ST7Q9NRC1 585 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 MARCH2Q9P0N8 246 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 LIMA1Q9UHB6 759 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 HCN2Q9UL51 889 aa10.72□□□□□ -0.69
GTF3C1-213ENST00000571886 VPS13AQ96RL7 3174 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 CHURC1-FNTBB4DL54 471 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 E5RJQ4 531 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 HOXC11O43248 304 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 PAPSS1O43252 624 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 MSI1O43347 362 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 TULP3O75386 442 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 ATP1A3P13637 1013 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 UCHL3P15374 230 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 PXNP49023 591 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 FNTBP49356 437 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 CCR3P51677 355 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 COG7P83436 770 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 MYL5Q02045 173 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 GAD2Q05329 585 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 KDSRQ06136 332 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 SRSF5Q13243 272 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 RAPGEF1Q13905 1077 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 TAF5Q15542 800 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 TRIP4Q15650 581 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 ZNF528Q3MIS6 628 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 RSRC2Q7L4I2 434 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 TMEM110Q86TL2 294 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 DENND1CQ8IV53 801 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 DHX40Q8IX18 779 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 SYNPOQ8N3V7 929 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 ZBTB44Q8NCP5 570 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 RPLP0P6Q8NHW5 317 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 PIEZO1Q92508 2521 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 BHMTQ93088 406 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 OTUB2Q96DC9 234 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 FAM81BQ96LP2 452 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 PNKPQ96T60 521 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 ABCC13Q9NSE7 274 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 PLK2Q9NYY3 685 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 SIK3Q9Y2K2 1263 aa10.71□□□□□ -0.69
GTF3C1-213ENST00000571886 A0A0A0MRY4 1105 aa10.7□□□□□ -0.7
GTF3C1-213ENST00000571886 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms