RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 CRELD1Q96HD1 420 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 PCIF1Q9H4Z3 704 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 DMAP1Q9NPF5 467 aaPredicted RBP12□□□□□ -0.49
CHMP6-202ENST00000571457 OLFML3Q9NRN5 406 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 TMEM30AQ9NV96 361 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 TBC1D7Q9P0N9 293 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 STK17AQ9UEE5 414 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 EIF2B4Q9UI10 523 aaKnown RBP12□□□□□ -0.49
CHMP6-202ENST00000571457 STON1Q9Y6Q2 735 aa12□□□□□ -0.49
CHMP6-202ENST00000571457 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 FAM149AA5PLN7 773 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 WASH3PC4AMC7 463 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 CAPN9O14815 690 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 RRP8O43159 456 aaKnown RBP11.99□□□□□ -0.49
CHMP6-202ENST00000571457 SYNCRIPO60506 623 aaKnown RBP11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TLR5O60602 858 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 C1QL1O75973 258 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 IGLV3-19P01714 112 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 ZDHHC11BP0C7U3 371 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 ACADMP11310 421 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 PLA2G2AP14555 144 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TPMTP51580 245 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TEAD4Q15561 434 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 INAVAQ3KP66 663 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TPGS1Q6ZTW0 290 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TRAPPC11Q7Z392 1133 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 MARCH9Q86YJ5 346 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 TMPRSS6Q8IU80 811 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 SCAMP5Q8TAC9 235 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 UCMAQ8WVF2 138 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 PRCCQ92733 491 aaPredicted RBP11.99□□□□□ -0.49
CHMP6-202ENST00000571457 SIPA1Q96FS4 1042 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 MRPL45Q9BRJ2 306 aaKnown RBP11.99□□□□□ -0.49
CHMP6-202ENST00000571457 B3GNT5Q9BYG0 378 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 KIAA1586Q9HCI6 787 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 IL37Q9NZH6 218 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
CHMP6-202ENST00000571457 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.99□□□□□ -0.49
CHMP6-202ENST00000571457 MGAQ8IWI9 3026 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 A0A1B0GVT2 93 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 FAM92AA1XBS5 289 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 CLDN5O00501 218 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 CISD3P0C7P0 127 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 CDK4P11802 303 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 HNF1BP35680 557 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 SLC5A3P53794 718 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 BNC1Q01954 994 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 ORC1Q13415 861 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 PTPRNQ16849 979 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 WDR72Q3MJ13 1102 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 CCDC157Q569K6 752 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 C6orf118Q5T5N4 469 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 STXBP4Q6ZWJ1 553 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 C1orf216Q8TAB5 229 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 DNAJC19Q96DA6 116 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 KCNK16Q96T55 309 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 MED10Q9BTT4 135 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 MKRN2Q9H000 416 aaKnown RBP11.98□□□□□ -0.49
CHMP6-202ENST00000571457 FBXO44Q9H4M3 255 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 PRORYQ9H606 182 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 TLR8Q9NR97 1041 aaKnown RBP11.98□□□□□ -0.49
CHMP6-202ENST00000571457 GMIPQ9P107 970 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 BTBD3Q9Y2F9 522 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 SLC27A6Q9Y2P4 619 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
CHMP6-202ENST00000571457 KCNJ18B7U540 433 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 PCDHGA12O60330 932 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 DFNA5O60443 496 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 GREM1O60565 184 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 IDEP14735 1019 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 ATP5C1P36542 298 aaKnown RBP11.97□□□□□ -0.49
CHMP6-202ENST00000571457 CSNK1EP49674 416 aaKnown RBP11.97□□□□□ -0.49
CHMP6-202ENST00000571457 CCT8P50990 548 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 CDH8P55286 799 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 SF3A1Q15459 793 aaKnown RBP11.97□□□□□ -0.49
CHMP6-202ENST00000571457 KIF19Q2TAC6 998 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 DHRS13Q6UX07 377 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 CBWD2Q8IUF1 395 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 SNX19Q92543 992 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 BAP1Q92560 729 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 IGSF8Q969P0 613 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 WBP2Q969T9 261 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 SMARCD1Q96GM5 515 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 KLF16Q9BXK1 252 aaPredicted RBP11.97□□□□□ -0.49
CHMP6-202ENST00000571457 DPEP3Q9H4B8 488 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 OSGEPQ9NPF4 335 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 THAP10Q9P2Z0 257 aaPredicted RBP11.97□□□□□ -0.49
CHMP6-202ENST00000571457 FTSJ1Q9UET6 329 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 NME7Q9Y5B8 376 aa11.97□□□□□ -0.49
CHMP6-202ENST00000571457 PLK4O00444 970 aa11.96□□□□□ -0.49
CHMP6-202ENST00000571457 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
CHMP6-202ENST00000571457 CST3P01034 146 aaPredicted RBP11.96□□□□□ -0.49
CHMP6-202ENST00000571457 JUPP14923 745 aa11.96□□□□□ -0.49
CHMP6-202ENST00000571457 TNNI1P19237 187 aa11.96□□□□□ -0.49
CHMP6-202ENST00000571457 ACO1P21399 889 aaKnown RBP11.96□□□□□ -0.49
CHMP6-202ENST00000571457 ITPKBP27987 946 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms