RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 OTUB2Q96DC9 234 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 HSFY1Q96LI6 401 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 CDK5RAP1Q96SZ6 601 aaKnown RBP14.06□□□□□ -0.16
RPAIN-207ENST00000570883 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 GANQ9H2C0 597 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 MARCH2Q9P0N8 246 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 TBC1D14Q9P2M4 693 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 LIMA1Q9UHB6 759 aaKnown RBP14.06□□□□□ -0.16
RPAIN-207ENST00000570883 GPR179Q6PRD1 2367 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 ZNF292O60281 2723 aa14.06□□□□□ -0.16
RPAIN-207ENST00000570883 EPHB6O15197 1021 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 LAMTOR5O43504 91 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 MED7O43513 233 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 KLKB1P03952 638 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 ATP1A3P13637 1013 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 UCHL3P15374 230 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 NBL1P41271 181 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 AMPD2Q01433 879 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 SATB1Q01826 763 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 NR1H3Q13133 447 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 RAPGEF1Q13905 1077 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
RPAIN-207ENST00000570883 BSPRYQ5W0U4 402 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 SMYD5Q6GMV2 418 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 TSSK4Q6SA08 328 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 RSRC2Q7L4I2 434 aaKnown RBP14.05□□□□□ -0.16
RPAIN-207ENST00000570883 TADA2BQ86TJ2 420 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 SLC47A2Q86VL8 602 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 SFTPA1Q8IWL2 248 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 DHX40Q8IX18 779 aaKnown RBP14.05□□□□□ -0.16
RPAIN-207ENST00000570883 CD101Q93033 1021 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 P2RY11Q96G91 374 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 IER2Q9BTL4 223 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 SLC4A5Q9BY07 1137 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 IRF2BPLQ9H1B7 796 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 PLCB1Q9NQ66 1216 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 TJP2Q9UDY2 1190 aa14.05□□□□□ -0.16
RPAIN-207ENST00000570883 EP300Q09472 2414 aaPredicted RBP14.04□□□□□ -0.16
RPAIN-207ENST00000570883 ANTXRLA6NF34 631 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 LGALS16A8MUM7 142 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 HOXC11O43248 304 aaPredicted RBP14.04□□□□□ -0.16
RPAIN-207ENST00000570883 ADH1CP00326 375 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 FYNP06241 537 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
RPAIN-207ENST00000570883 ADH5P11766 374 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 HOXC13P31276 330 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SLC6A11P48066 632 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 CSTF1Q05048 431 aaKnown RBP14.04□□□□□ -0.16
RPAIN-207ENST00000570883 GOLGA8FQ08AF8 430 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 GOLGA8DPQ0D2H9 430 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 GRSF1Q12849 480 aaKnown RBP eCLIP14.04□□□□□ -0.16
RPAIN-207ENST00000570883 PDCLQ13371 301 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 BTBD8Q5XKL5 378 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 TMEM25Q86YD3 366 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 PASD1Q8IV76 773 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 ETFBKMTQ8IXQ9 262 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 PHTF2Q8N3S3 785 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SYNPOQ8N3V7 929 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SPEM1Q8N4L4 309 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 WDTC1Q8N5D0 677 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 STK32AQ8WU08 396 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 IRGQQ8WZA9 623 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 BPIFA3Q9BQP9 254 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 MIS12Q9H081 205 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SPHK2Q9NRA0 654 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 ST7Q9NRC1 585 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 FBXO4Q9UKT5 387 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 PCDHGC3Q9UN70 934 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SIK3Q9Y2K2 1263 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 GVINP1Q7Z2Y8 2422 aa14.04□□□□□ -0.16
RPAIN-207ENST00000570883 SLC12A8A0AV02 714 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 SYCE3A1L190 88 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 LRRC10BA6NIK2 292 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 E5RJQ4 531 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 F8VZ95 297 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 PAPSS1O43252 624 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 MSI1O43347 362 aaKnown RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 RNF40O75150 1001 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 FBXO21O94952 628 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 LTFP02788 710 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 HMBSP08397 361 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 DRD1P21728 446 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 PTK2Q05397 1052 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 ZNF528Q3MIS6 628 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 MSANTD2Q6P1R3 559 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 FMNL3Q8IVF7 1028 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 SCUBE3Q8IX30 993 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 NELL1Q92832 810 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 PIWIL1Q96J94 861 aaKnown RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 ABCC13Q9NSE7 274 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 FAM207AQ9NSI2 230 aaPredicted RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 OLA1Q9NTK5 396 aaKnown RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 SFMBT1Q9UHJ3 866 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 LSM7Q9UK45 103 aaKnown RBP14.03□□□□□ -0.16
RPAIN-207ENST00000570883 STRIP2Q9ULQ0 834 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 R4GN57 208 aa14.03□□□□□ -0.16
RPAIN-207ENST00000570883 PTPRZ1P23471 2315 aaPredicted RBP14.02□□□□□ -0.16
RPAIN-207ENST00000570883 PROB1E7EW31 1015 aa14.02□□□□□ -0.17
RPAIN-207ENST00000570883 K7ESF4 209 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms