RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 KCTD19Q17RG1 926 aaPredicted RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 RNF43Q68DV7 783 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 PTRHD1Q6GMV3 140 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 TIGD7Q6NT04 549 aaPredicted RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 MFN1Q8IWA4 741 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ALLCQ8N6M5 410 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 HTR3CQ8WXA8 447 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 PURBQ96QR8 312 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 CEP41Q9BYV8 373 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CYP4F12Q9HCS2 524 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 LATS2Q9NRM7 1088 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ACOT9Q9Y305 439 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 NFAT5O94916 1531 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 LACTBL1A8MY62 500 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CLASP2O75122 1294 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 CHRM3P20309 590 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CCDC153Q494R4 210 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 C10orf120Q5SQS8 335 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ZDHHC17Q8IUH5 632 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 IQCKQ8N0W5 287 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 TRPC7Q9HCX4 862 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 ZNF197O14709 1029 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 JCHAINP01591 159 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CDH2P19022 906 aaPredicted RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 MGAT1P26572 445 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 MMP14P50281 582 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 CACNA2D1P54289 1103 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 TAF1CQ15572 869 aaPredicted RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 MGAT5BQ3V5L5 792 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 MROH8Q9H579 483 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 NDUFA13Q9P0J0 144 aa15.81■□□□□ 0.12
CIITA-204ENST00000570546 DRG1Q9Y295 367 aaKnown RBP15.81■□□□□ 0.12
CIITA-204ENST00000570546 MYO1GB0I1T2 1018 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 H0Y626 953 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 NOL4O94818 638 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TOMM70O94826 608 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TRIM16O95361 564 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ABHD2P08910 425 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 POU4F1Q01851 419 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ADCK1Q86TW2 530 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ATP6V0D2Q8N8Y2 350 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 OR9Q1Q8NGQ5 310 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 BLOC1S5Q8TDH9 187 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TUBGCP3Q96CW5 907 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 GPBP1L1Q9HC44 474 aaPredicted RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 SAE1Q9UBE0 346 aaPredicted RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 SNX13Q9Y5W8 968 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ACKR2O00590 384 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 PSMC3P17980 439 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 NR2C2P49116 596 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ITGA9Q13797 1035 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 SIKE1Q9BRV8 207 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 PORCNQ9H237 461 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TRDMT1O14717 391 aaKnown RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 SLC2A3P11169 496 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 GP5P40197 560 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 RGS4P49798 205 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TWF1Q12792 350 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 FBXO47Q5MNV8 452 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 MRNIPQ6NTE8 343 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TTC23LQ6PF05 361 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 CERKQ8TCT0 537 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 DACH2Q96NX9 599 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 SNTG2Q9NY99 539 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TPST1O60507 370 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 IRF1P10914 325 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 GLB1LQ6UWU2 654 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 LRRC74BQ6ZQY2 392 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ZNF786Q8N393 782 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 ZBTB10Q96DT7 871 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 SH3GL2Q99962 352 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 TCF7L2Q9NQB0 619 aa15.8■□□□□ 0.12
CIITA-204ENST00000570546 CHCHD3Q9NX63 227 aaKnown RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 ABI2Q9NYB9 513 aaPredicted RBP15.8■□□□□ 0.12
CIITA-204ENST00000570546 DDX3YO15523 660 aaKnown RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 MAN1A2O60476 641 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 ZNF286BP0CG31 522 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 AMPD1P23109 780 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 OR1G1P47890 313 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 TKTL1P51854 596 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 KRT72Q14CN4 511 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 FUT11Q495W5 492 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 LRRC38Q5VT99 294 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.79■□□□□ 0.12
CIITA-204ENST00000570546 EXOC3L1Q86VI1 746 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 SPATC1LQ9H0A9 340 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 PIH1D1Q9NWS0 290 aaKnown RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 UBP1Q9NZI7 540 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 VAV3Q9UKW4 847 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 RNF112Q9ULX5 631 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 SOX13Q9UN79 622 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 MAGEB16A2A368 324 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 NCAM2O15394 837 aa15.79■□□□□ 0.12
CIITA-204ENST00000570546 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
CIITA-204ENST00000570546 HMGCRP04035 888 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms