RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 HMGB4Q8WW32 186 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 TATDN2Q93075 761 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 WBP2Q969T9 261 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 DHTKD1Q96HY7 919 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 ZDHHC4Q9NPG8 344 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 OSER1Q9NX31 292 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 CLIC5Q9NZA1 410 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 STRIP2Q9ULQ0 834 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 MYOFQ9NZM1 2061 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 SPTBN4Q9H254 2564 aa9.39□□□□□ -0.91
NPLOC4-204ENST00000570324 KIAA1549LQ6ZVL6 1849 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 BICDL2A1A5D9 508 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 TRIM49BA6NDI0 452 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CYBBP04839 570 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 HMBSP08397 361 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 VDRP11473 427 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 HOXB2P14652 356 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 NTSR1P30989 418 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CHKAP35790 457 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 WASP42768 502 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 KIR2DL1P43626 348 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 DGKGP49619 791 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 TKTL1P51854 596 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 YWHAGP61981 247 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 GOLGA7BQ2TAP0 167 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 RNF43Q68DV7 783 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 ARHGAP17Q68EM7 881 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 LPCAT2Q7L5N7 544 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CYP2U1Q7Z449 544 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 RASSF3Q86WH2 238 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 SFTPA1Q8IWL2 248 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 ETFBKMTQ8IXQ9 262 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 CHPFQ8IZ52 775 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 TERB1Q8NA31 727 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 ANKRD52Q8NB46 1076 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 ENGASEQ8NFI3 743 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 MDGA1Q8NFP4 955 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 RNF139Q8WU17 664 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 BHMTQ93088 406 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 NT5C1BQ96P26 610 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 ARID3AQ99856 593 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 UBXN6Q9BZV1 441 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 TSPAN16Q9UKR8 245 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 GPR179Q6PRD1 2367 aa9.38□□□□□ -0.91
NPLOC4-204ENST00000570324 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 EML5Q05BV3 1969 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 SLC12A8A0AV02 714 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 BCLAF3A2AJT9 711 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 ANTXRLA6NF34 631 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 XPO1O14980 1071 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 CACNG3O60359 315 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 STC2O76061 302 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 ZBED1O96006 694 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 CORO1AP31146 461 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 FMO5P49326 533 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 LIMK1P53667 647 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 BCAT1P54687 386 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 MCCD1P59942 119 aaPredicted RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 MESP2Q0VG99 397 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 BST2Q10589 180 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 E2F5Q15329 346 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PMS2CLQ68D20 193 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 ARMCX6Q7L4S7 300 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 SCD5Q86SK9 330 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PPM1KQ8N3J5 372 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 ZNF276Q8N554 614 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 UCMAQ8WVF2 138 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 RLN3Q8WXF3 142 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PIGKQ92643 395 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 SLC35C1Q96A29 364 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 CEP63Q96MT8 703 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 EDEM2Q9BV94 578 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 OLA1Q9NTK5 396 aaKnown RBP9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PLK2Q9NYY3 685 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 MARK1Q9P0L2 795 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 MARCH2Q9P0N8 246 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 MAN1B1Q9UKM7 699 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 KIAA1257Q9ULG3 409 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 COQ4Q9Y3A0 265 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 PCDHB4Q9Y5E5 795 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 USP3Q9Y6I4 520 aa9.37□□□□□ -0.91
NPLOC4-204ENST00000570324 THADAQ6YHU6 1953 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 BIN1O00499 593 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 TRIM24O15164 1050 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 ADAM23O75077 832 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 FGFR1OPO95684 399 aaKnown RBP9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 GNA14O95837 355 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 SETSIPP0DME0 302 aa9.36□□□□□ -0.91
NPLOC4-204ENST00000570324 LCP1P13796 627 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms