RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	EDEM3	Q9BZQ6	932 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	NMUR1	Q9HB89	426 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	HPS4	Q9NQG7	708 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	SIK3	Q9Y2K2	1263 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	WNT6	Q9Y6F9	365 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	ZDBF2	Q9HCK1	2354 aa		18.83	■□□□□ 0.6
PKD1-238	ENST00000570150	CAPN9	O14815	690 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	CYBB	P04839	570 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	CLCN1	P35523	988 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	SOX5	P35711	763 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	RING1	Q06587	406 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	TNK2	Q07912	1038 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	EFEMP1	Q12805	493 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	PDCL	Q13371	301 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	MSANTD2	Q6P1R3	559 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	ZC3H14	Q6PJT7	736 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	MIB1	Q86YT6	1006 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	CD101	Q93033	1021 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	PPP1R13B	Q96KQ4	1090 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	SERPINB11	Q96P15	392 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	XPO6	Q96QU8	1125 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	NUP58	Q9BVL2	599 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	FOXQ1	Q9C009	403 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	NUCKS1	Q9H1E3	243 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	CHRD	Q9H2X0	955 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	POPDC2	Q9HBU9	364 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	RTN4	Q9NQC3	1192 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	RRN3	Q9NYV6	651 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	RASAL2	Q9UJF2	1139 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	FBXO4	Q9UKT5	387 aa		18.82	■□□□□ 0.6
PKD1-238	ENST00000570150	PATJ	Q8NI35	1801 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	YJEFN3	A6XGL0	299 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150		E7ENQ6	273 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	LAMTOR5	O43504	91 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	SLC2A3	P11169	496 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	ADH5	P11766	374 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	TARS	P26639	723 aa	Known RBP	18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	GJA4	P35212	333 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	SCNN1A	P37088	669 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	RGS7	P49802	495 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	CCR3	P51677	355 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	NRL	P54845	237 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	YWHAZ	P63104	245 aa	Known RBP	18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	IQCB1	Q15051	598 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	DHCR24	Q15392	516 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	ZNF528	Q3MIS6	628 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	TMEM196	Q5HYL7	178 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	SLC47A2	Q86VL8	602 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	C1orf210	Q8IVY1	113 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	KCNV2	Q8TDN2	545 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	FAM149B1	Q96BN6	582 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	ZSWIM1	Q9BR11	485 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	GAN	Q9H2C0	597 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	LMAN1L	Q9HAT1	526 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	OSER1	Q9NX31	292 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	NDRG2	Q9UN36	371 aa	Known RBP	18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	PAXBP1	Q9Y5B6	917 aa		18.81	■□□□□ 0.6
PKD1-238	ENST00000570150	DENND4C	Q5VZ89	1909 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	TULP2	O00295	520 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	HOXC11	O43248	304 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	HSF2BP	O75031	334 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	ARSA	P15289	507 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	GBP1	P32455	592 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	CDH5	P33151	784 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	TCF15	Q12870	199 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	HSF5	Q4G112	596 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	TRIM68	Q6AZZ1	485 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	DPY19L2P1	Q6NXN4	242 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	DENND1B	Q6P3S1	775 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	ALYREF	Q86V81	257 aa	Known RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	SCUBE3	Q8IX30	993 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	SPEM1	Q8N4L4	309 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	AZIN2	Q96A70	460 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	HSD3B7	Q9H2F3	369 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	SPHK2	Q9NRA0	654 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	SPATA6	Q9NWH7	488 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	DLGAP2	Q9P1A6	1054 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150	SLC12A6	Q9UHW9	1150 aa		18.8	■□□□□ 0.6
PKD1-238	ENST00000570150		A0A1B0GTH6	734 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	SLC12A8	A0AV02	714 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	STC2	O76061	302 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	TBX18	O95935	607 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	DCN	P07585	359 aa	Known RBP	18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	NCAM1	P13591	858 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	ATP1A3	P13637	1013 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	FER	P16591	822 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	SLC11A2	P49281	568 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	JAM2	P57087	298 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	CDR2	Q01850	454 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	APBA1	Q02410	837 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	APTX	Q7Z2E3	356 aa	Known RBP	18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	ZNF397	Q8NF99	534 aa	Predicted RBP	18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	ACD	Q96AP0	544 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	SEMA4A	Q9H3S1	761 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	CBX8	Q9HC52	389 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	MARK1	Q9P0L2	795 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	OBSL1	O75147	1896 aa		18.79	■□□□□ 0.6
PKD1-238	ENST00000570150	TYW5	A2RUC4	315 aa	Known RBP	18.78	■□□□□ 0.6
PKD1-238	ENST00000570150		E5RJQ4	531 aa		18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms