RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 KLK7P49862 253 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 YWHAEP62258 255 aaKnown RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 ADIGQ0VDE8 80 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 EFEMP1Q12805 493 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 KCNJ12Q14500 433 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PDGFRLQ15198 375 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 AASDHQ4L235 1098 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 VWA3BQ502W6 1294 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 MIIPQ5JXC2 388 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 SNX30Q5VWJ9 437 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 PMF1Q6P1K2 205 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 DENND1BQ6P3S1 775 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 RHBDF2Q6PJF5 856 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 GBP6Q6ZN66 633 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 C12orf40Q86WS4 652 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 BBS7Q8IWZ6 715 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 TTC39CQ8N584 583 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 OVCA2Q8WZ82 227 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 EDEM1Q92611 657 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 BHMTQ93088 406 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 TUBGCP2Q9BSJ2 902 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 MIS12Q9H081 205 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 VPS16Q9H269 839 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 NDST4Q9H3R1 872 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 ZDHHC4Q9NPG8 344 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 TLR8Q9NR97 1041 aaKnown RBP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3B3-211ENST00000568291 FANCLQ9NW38 375 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 HESX1Q9UBX0 185 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 ZMYM5Q9UJ78 669 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 RASAL2Q9UJF2 1139 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 USP24Q9UPU5 2620 aa9.99□□□□□ -0.81
SF3B3-211ENST00000568291 YJEFN3A6XGL0 299 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 E7ENQ6 273 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 RPP40O75818 363 aaKnown RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 EPN2O95208 641 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 ZBED1O96006 694 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 CYP17A1P05093 508 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 ATP5C1P36542 298 aaKnown RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 ZNF132P52740 706 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SEC13P55735 322 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 YWHAGP61981 247 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 GCNT1Q02742 428 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 KCNMA1Q12791 1236 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 GRSF1Q12849 480 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 DHCR24Q15392 516 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SF3A2Q15428 464 aaKnown RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 EXOC3L4Q17RC7 722 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 GAB4Q2WGN9 574 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 PKDCCQ504Y2 493 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 TCP11X2Q5H9J9 407 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 TMEM196Q5HYL7 178 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 RAB41Q5JT25 222 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 LY6G5CQ5SRR4 150 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 EMC10Q5UCC4 262 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 IL31Q6EBC2 164 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 CAVIN1Q6NZI2 390 aaKnown RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SASS6Q6UVJ0 657 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 LCLAT1Q6UWP7 414 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 RBM43Q6ZSC3 357 aaKnown RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 BHLHA9Q7RTU4 235 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 TMEM25Q86YD3 366 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 CPA6Q8N4T0 437 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 C12orf50Q8NA57 414 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 GAB3Q8WWW8 586 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 ATP2A3Q93084 1043 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 ERLEC1Q96DZ1 483 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 P2RY11Q96G91 374 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 FAXDC2Q96IV6 333 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 P2RY13Q9BPV8 354 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 DNAI2Q9GZS0 605 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 LRRC4Q9HBW1 653 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 PLCB1Q9NQ66 1216 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 COMMD8Q9NX08 183 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 DNAJC12Q9UKB3 198 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 SH3BP1Q9Y3L3 701 aa9.98□□□□□ -0.81
SF3B3-211ENST00000568291 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 FOXN3O00409 490 aaPredicted RBP9.97□□□□□ -0.81
SF3B3-211ENST00000568291 TRDMT1O14717 391 aaKnown RBP9.97□□□□□ -0.81
SF3B3-211ENST00000568291 XPO1O14980 1071 aaKnown RBP9.97□□□□□ -0.81
SF3B3-211ENST00000568291 AXIN1O15169 862 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 THAP12O43422 761 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 GREM1O60565 184 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 RNF40O75150 1001 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 KLKB1P03952 638 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 PAEPP09466 180 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 OPRD1P41143 372 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 PDE6CP51160 858 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 BCAT1P54687 386 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 MFAP3P55082 362 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 SLC8A3P57103 927 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 KDSRQ06136 332 aa9.97□□□□□ -0.81
SF3B3-211ENST00000568291 BST2Q10589 180 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms