RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 LRRC4Q9HBW1 653 aa13.01□□□□□ -0.33
KLHDC4-216ENST00000566561 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
KLHDC4-216ENST00000566561 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
KLHDC4-216ENST00000566561 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.01□□□□□ -0.33
KLHDC4-216ENST00000566561 PTPRDP23468 1912 aa13.01□□□□□ -0.33
KLHDC4-216ENST00000566561 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 EML5Q05BV3 1969 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 DENND4CQ5VZ89 1909 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 XPO1O14980 1071 aaKnown RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 AXIN1O15169 862 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 P4HA2O15460 535 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 APBB3O95704 486 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 TIE1P35590 1138 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 GRIA2P42262 883 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 DGKEP52429 567 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 MRPS21P82921 87 aaKnown RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 PDE4CQ08493 712 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 MESP2Q0VG99 397 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 BST2Q10589 180 aaKnown RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 EFEMP1Q12805 493 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 PREPLQ4J6C6 727 aaPredicted RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 RAB41Q5JT25 222 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 TMEM270Q6UE05 265 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 TPGS1Q6ZTW0 290 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 RSRC2Q7L4I2 434 aaKnown RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 SFTPA1Q8IWL2 248 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 FAM160A2Q8N612 972 aaPredicted RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 UBA3Q8TBC4 463 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
KLHDC4-216ENST00000566561 CLIC5Q9NZA1 410 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 DEC1Q9P2X7 70 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 RASAL2Q9UJF2 1139 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 KIAA1257Q9ULG3 409 aa13□□□□□ -0.33
KLHDC4-216ENST00000566561 TBC1D3BA6NDS4 549 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 NEDD8-MDP1E9PL57 170 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 TULP2O00295 520 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 PMM2O15305 246 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 GDF9O60383 454 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 GREM1O60565 184 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 TULP3O75386 442 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 KLF8O95600 359 aaPredicted RBP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ZBED1O96006 694 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 AFPP02771 609 aaKnown RBP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 HMBSP08397 361 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 PAEPP09466 180 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 TNFRSF4P43489 277 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 YWHAGP61981 247 aaKnown RBP eCLIP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 COG7P83436 770 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 EMC10Q5UCC4 262 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 CACNA2D4Q7Z3S7 1137 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ZNF276Q8N554 614 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ALLCQ8N6M5 410 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 UBR7Q8N806 425 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 C12orf50Q8NA57 414 aaPredicted RBP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 KAT5Q92993 513 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 XPO6Q96QU8 1125 aaKnown RBP12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 BBS2Q9BXC9 721 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 ULBP1Q9BZM6 244 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 STRIP2Q9ULQ0 834 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
KLHDC4-216ENST00000566561 IGF2RP11717 2491 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 O00370 1275 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 STC2O76061 302 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 SETSIPP0DME0 302 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 TYRP14679 529 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 PMLP29590 882 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 LIMK1P53667 647 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 MARSP56192 900 aaKnown RBP12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 ADIGQ0VDE8 80 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 CRY1Q16526 586 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 EOGTQ5NDL2 527 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 C10orf76Q5T2E6 689 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 GRAMD4Q6IC98 578 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 ANO7Q6IWH7 933 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 KBTBD6Q86V97 674 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 ETFBKMTQ8IXQ9 262 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 SIX6OS1Q8N1H7 587 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 IL17RCQ8NAC3 791 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 TXNDC5Q8NBS9 432 aaKnown RBP12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 RBBP8NLQ8NC74 664 aaPredicted RBP12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 LMO3Q8TAP4 145 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 RNF139Q8WU17 664 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 NDRG1Q92597 394 aaKnown RBP12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 BHMTQ93088 406 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 ZDHHC4Q9NPG8 344 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 DNAJC17Q9NVM6 304 aaKnown RBP12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 MARCH2Q9P0N8 246 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 WDR35Q9P2L0 1181 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 EBF1Q9UH73 591 aa12.98□□□□□ -0.33
KLHDC4-216ENST00000566561 RWDD2AQ9UIY3 292 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms