RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 CYP4F12Q9HCS2 524 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 TM7SF2O76062 418 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 SRP72O76094 671 aaKnown RBP13□□□□□ -0.33
COMMD4-209ENST00000564068 CCNB1P14635 433 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 ATICP31939 592 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 CDK7P50613 346 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 STX5Q13190 355 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 GADL1Q6ZQY3 521 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 PTPRN2Q92932 1015 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 EBF3Q9H4W6 596 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 DRG1Q9Y295 367 aaKnown RBP13□□□□□ -0.33
COMMD4-209ENST00000564068 AP4S1Q9Y587 144 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 AK5Q9Y6K8 562 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 ZNF189O75820 626 aaPredicted RBP13□□□□□ -0.33
COMMD4-209ENST00000564068 ME2P23368 584 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 CDH8P55286 799 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 NUP107P57740 925 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 DAB2P98082 770 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 CNPY1Q3B7I2 92 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 ARL13BQ3SXY8 428 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 CHADLQ6NUI6 762 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 PATL1Q86TB9 770 aaKnown RBP13□□□□□ -0.33
COMMD4-209ENST00000564068 SATL1Q86VE3 508 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 KIF12Q96FN5 646 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 PALMDQ9NP74 551 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 RRN3Q9NYV6 651 aa13□□□□□ -0.33
COMMD4-209ENST00000564068 WDR27A2RRH5 827 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PAMP19021 973 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PTGER2P43116 358 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 EFNA5P52803 228 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 NSUN2Q08J23 767 aaKnown RBP eCLIP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 SHROOM1Q2M3G4 852 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 STRIP1Q5VSL9 837 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PCYOX1LQ8NBM8 494 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 BHLHE22Q8NFJ8 381 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 KLHL25Q9H0H3 589 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 C17orf75Q9HAS0 396 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ATP11BQ9Y2G3 1177 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 AP4B1Q9Y6B7 739 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 KDELR1P24390 212 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PEX2P28328 305 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 NEDD8Q15843 81 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 Q3C1V9 767 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 AGKQ53H12 422 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PCDH20Q8N6Y1 951 aaKnown RBP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 FAM172AQ8WUF8 416 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PRKAG3Q9UGI9 489 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ANGPTL3Q9Y5C1 460 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 TRPC1P48995 793 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 CDC16Q13042 620 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 NFIL3Q16649 462 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 DGKDQ16760 1214 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ARMCX2Q7L311 632 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 GIPC2Q8TF65 315 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 NAT14Q8WUY8 206 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ELMO2Q96JJ3 720 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 STAP1Q9ULZ2 295 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 M0R3G1 203 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ESRRBO95718 433 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ITGB3P05106 788 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PEX6Q13608 980 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ANKRD22Q5VYY1 191 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.99□□□□□ -0.33
COMMD4-209ENST00000564068 C4orf19Q8IY42 314 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 S100A14Q9HCY8 104 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 MYRFQ9Y2G1 1151 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
COMMD4-209ENST00000564068 ROBO3Q96MS0 1386 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 APOC2P02655 101 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 CETPP11597 493 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 CHRNB2P17787 502 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TRIM74Q86UV6 250 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TRIM73Q86UV7 250 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TMCO5AQ8N6Q1 288 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TSPAN14Q8NG11 270 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TFB1MQ8WVM0 346 aaKnown RBP12.98□□□□□ -0.33
COMMD4-209ENST00000564068 LZICQ8WZA0 190 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 VPS50Q96JG6 964 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 MARK4Q96L34 752 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 ADAM7Q9H2U9 754 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TSR3Q9UJK0 312 aaKnown RBP12.98□□□□□ -0.33
COMMD4-209ENST00000564068 RUVBL2Q9Y230 463 aaKnown RBP12.98□□□□□ -0.33
COMMD4-209ENST00000564068 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 SERPINA6P08185 405 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 NOMO3P69849 1222 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 CYP1B1Q16678 543 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 ZNF518BQ9C0D4 1074 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 NACA2Q9H009 215 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 PNPOQ9NVS9 261 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 LTN1O94822 1766 aa12.98□□□□□ -0.33
COMMD4-209ENST00000564068 TRIM13O60858 407 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms