RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 FBXO39Q8N4B4 442 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 STKLD1Q8NE28 680 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 CTCFLQ8NI51 663 aaPredicted RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 SPPL2BQ8TCT7 592 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 C2orf15Q8WU43 125 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 SCFD1Q8WVM8 642 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 APOBEC4Q8WW27 367 aaKnown RBP11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 SLC29A3Q9BZD2 475 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 BTBD1Q9H0C5 482 aa11.44□□□□□ -0.58
HDGFL3-204ENST00000563790 MGAM2Q2M2H8 2515 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 PRSS44E7EML9 344 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 SDC3O75056 442 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 PSMD10O75832 226 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 CNTN5O94779 1100 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 NOL4O94818 638 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 TYMPP19971 482 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 AARSP49588 968 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 ZFAND4Q86XD8 727 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 OR10T2Q8NGX3 314 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 APOLD1Q96LR9 279 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 AASDHPPTQ9NRN7 309 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 EVA1BQ9NVM1 165 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 TBC1D14Q9P2M4 693 aa11.43□□□□□ -0.58
HDGFL3-204ENST00000563790 A0A1W2PQ27 194 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 A0A1W2PQ64 194 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 A0A1W2PQC6 194 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 GIMD1P0DJR0 217 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 KCNE1P15382 129 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 GLRA2P23416 452 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 ARL2P36404 184 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 GNAQP50148 359 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 NAPAP54920 295 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 SLC7A9P82251 487 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 SEPT6Q14141 434 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 EEF1DP3Q658K8 133 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 KIAA0895LQ68EN5 471 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 WWC2Q6AWC2 1192 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 ASB18Q6ZVZ8 466 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 RAB11FIP2Q7L804 512 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 SPATS2Q86XZ4 545 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 FSIP1Q8NA03 581 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 EPAS1Q99814 870 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 ZCWPW1Q9H0M4 648 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 EBF2Q9HAK2 575 aa11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 TOPORSQ9NS56 1045 aaPredicted RBP11.42□□□□□ -0.58
HDGFL3-204ENST00000563790 SH2B2O14492 632 aaPredicted RBP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 WNT9AO14904 365 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 NPC1O15118 1278 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 FECHP22830 423 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 DGKAP23743 735 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 CSTF2P33240 577 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 CLCN1P35523 988 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 TRAPPC10P48553 1259 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 PRPF4BQ13523 1007 aaKnown RBP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 ZRANB3Q5FWF4 1079 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 TMPRSS9Q7Z410 1059 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 KCTD17Q8N5Z5 321 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 LRRN4CLQ8ND94 238 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 GJA10Q969M2 543 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 TRIM9Q9C026 710 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 GLT8D2Q9H1C3 349 aa11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 DNAJC17Q9NVM6 304 aaKnown RBP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDGFL3-204ENST00000563790 PRAMEF33A0A0G2JMD5 474 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 PRAMEF10O60809 474 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 CD82P27701 267 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 KRTAP10-9P60411 292 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 SSRP1Q08945 709 aaKnown RBP11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 ZRSR2Q15696 482 aaKnown RBP11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 C14orf28Q4W4Y0 310 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 CCDC13Q8IYE1 715 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 LHX5Q9H2C1 402 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 SGK2Q9HBY8 427 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 CYLDQ9NQC7 956 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 GJB4Q9NTQ9 266 aa11.4□□□□□ -0.58
HDGFL3-204ENST00000563790 NYNRINQ9P2P1 1898 aaKnown RBP11.4□□□□□ -0.59
HDGFL3-204ENST00000563790 ERICH2A1L162 156 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 FFAR2O15552 330 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 CACNG3O60359 315 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 SORBS2O94875 1100 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 BPIP17213 487 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 GPR15P49685 360 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 ART1P52961 327 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 YARSP54577 528 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 RNASE9P60153 205 aaKnown RBP11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 TMEM132AQ24JP5 1023 aa11.39□□□□□ -0.59
HDGFL3-204ENST00000563790 CDCA2Q69YH5 1023 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms