RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FSCN2O14926 492 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 MDM4O15151 490 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 KDELR1P24390 212 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 CDH6P55285 790 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 MTMR3Q13615 1198 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 KRT81Q14533 505 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 KAZNQ674X7 775 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 FAM109BQ6ICB4 259 aaPredicted RBP22.87■■□□□ 1.25
LINC01960-201ENST00000563759 CALN1Q9BXU9 219 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 PIGVQ9NUD9 493 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 IL37Q9NZH6 218 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 GMIPQ9P107 970 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 YIPF1Q9Y548 306 aa22.87■■□□□ 1.25
LINC01960-201ENST00000563759 SLC38A8A6NNN8 435 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 LILRB3O75022 631 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 ENDOD1O94919 500 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 CDKN2BP42772 138 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 ERMARDQ5T6L9 678 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 BNIPLQ7Z465 357 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 ANKS1BQ7Z6G8 1248 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 SCD5Q86SK9 330 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 CCDC185Q8N715 623 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 CMASQ8NFW8 434 aaPredicted RBP22.86■■□□□ 1.25
LINC01960-201ENST00000563759 RNF139Q8WU17 664 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 HERPUD2Q9BSE4 406 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 DDX47Q9H0S4 455 aaKnown RBP22.86■■□□□ 1.25
LINC01960-201ENST00000563759 NMUR1Q9HB89 426 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 RXFP1Q9HBX9 757 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 GPATCH2LQ9NWQ4 482 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 COMMD8Q9NX08 183 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 MAGED2Q9UNF1 606 aaPredicted RBP22.86■■□□□ 1.25
LINC01960-201ENST00000563759 AP4E1Q9UPM8 1137 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 NR2E1Q9Y466 385 aa22.86■■□□□ 1.25
LINC01960-201ENST00000563759 RANBP2P49792 3224 aaKnown RBP22.86■■□□□ 1.25
LINC01960-201ENST00000563759 FAM92AA1XBS5 289 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 C3orf70A6NLC5 250 aaPredicted RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 CXCL14O95715 111 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 CA3P07451 260 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 CD48P09326 243 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 CNPP09543 421 aaKnown RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 KRT10P13645 584 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 PTPN7P35236 360 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 ALDH1A3P47895 512 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 PPP2R5EQ16537 467 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 SND1Q7KZF4 910 aaKnown RBP eCLIP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 TAC4Q86UU9 113 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 MAP7D3Q8IWC1 876 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 DQX1Q8TE96 717 aaKnown RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 PGAP3Q96FM1 320 aaPredicted RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 hCG_1818297A0A087WSY0 165 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 TJP3O95049 919 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 F9P00740 461 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 PGFP49763 221 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 TAF10Q12962 218 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 ZC3H12AQ5D1E8 599 aaKnown RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 GPR161Q8N6U8 529 aaKnown RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 POF1BQ8WVV4 589 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 EPC1Q9H2F5 836 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 TLR9Q9NR96 1032 aa22.85■■□□□ 1.25
LINC01960-201ENST00000563759 TLR8Q9NR97 1041 aaKnown RBP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.85■■□□□ 1.25
LINC01960-201ENST00000563759 CHD7Q9P2D1 2997 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 ADH1AP07327 375 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 KLF1Q13351 362 aaPredicted RBP22.84■■□□□ 1.25
LINC01960-201ENST00000563759 VEPH1Q14D04 833 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 PDK2Q15119 407 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 PLPP4Q5VZY2 271 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 SPRED2Q7Z698 418 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 DHX35Q9H5Z1 703 aaKnown RBP22.84■■□□□ 1.25
LINC01960-201ENST00000563759 MYO7AQ13402 2215 aa22.84■■□□□ 1.25
LINC01960-201ENST00000563759 C5orf67F2Z3F1 127 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 PHF2O75151 1096 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 ARHGEF15O94989 841 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 GBP1P32455 592 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 PSEN1P49768 467 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 ERVFC1P60507 584 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 PPP6R3Q5H9R7 873 aaPredicted RBP22.83■■□□□ 1.25
LINC01960-201ENST00000563759 PRELID2Q8N945 189 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 LRRC1Q9BTT6 524 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 EMILIN2Q9BXX0 1053 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 UBE2OQ9C0C9 1292 aaKnown RBP22.83■■□□□ 1.25
LINC01960-201ENST00000563759 SMOC2Q9H3U7 446 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 OSER1Q9NX31 292 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 MAFFQ9ULX9 164 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 OBSL1O75147 1896 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 ANAPC1Q9H1A4 1944 aa22.83■■□□□ 1.25
LINC01960-201ENST00000563759 UBE3AQ05086 875 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 DPYSL3Q14195 570 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 SIX1Q15475 284 aaPredicted RBP22.83■■□□□ 1.24
LINC01960-201ENST00000563759 TAF12Q16514 161 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 TCEAL8Q8IYN2 117 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 ZDHHC14Q8IZN3 488 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 SPPL3Q8TCT6 385 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 TTLL2Q9BWV7 592 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 SLITRK6Q9H5Y7 841 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 NUDT5Q9UKK9 219 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 INSL5Q9Y5Q6 135 aa22.83■■□□□ 1.24
LINC01960-201ENST00000563759 DYNC1I1O14576 645 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 CSH1P0DML2 217 aa22.82■■□□□ 1.24
LINC01960-201ENST00000563759 CSH2P0DML3 217 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms