RNA–Protein interactions for RNA: ENST00000563522.5

PDXDC1-208, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-208ENST00000563522 GFRA2O00451 464 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 CLDN5O00501 218 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 SCAMP3O14828 347 aaKnown RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 TGFB1I1O43294 461 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 CACNG3O60359 315 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 CD59P13987 128 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 HOXB2P14652 356 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 AP3M2P53677 418 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 SLC5A3P53794 718 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 MYL6P60660 151 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 ZNF33AQ06730 810 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GOLGA8FQ08AF8 430 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GOLGA8DPQ0D2H9 430 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 TRPC3Q13507 836 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 COL9A2Q14055 689 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 ACAP1Q15027 740 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 SYCP2LQ5T4T6 812 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GRAMD4Q6IC98 578 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 LRSAM1Q6UWE0 723 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 RAB44Q7Z6P3 723 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 FAM35AQ86V20 835 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 TMEM25Q86YD3 366 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 BBS7Q8IWZ6 715 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 C12orf56Q8IXR9 622 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 MINDY1Q8N5J2 469 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 XXYLT1Q8NBI6 393 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 FOXJ1Q92949 421 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 SMARCD1Q96GM5 515 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 MRGPRX2Q96LB1 330 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 XPO6Q96QU8 1125 aaKnown RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GABRG3Q99928 467 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 GTPBP2Q9BX10 602 aaKnown RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 PANK2Q9BZ23 570 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 ZDHHC5Q9C0B5 715 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 FBXO44Q9H4M3 255 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 CD248Q9HCU0 757 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 MARK1Q9P0L2 795 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 CHORDC1Q9UHD1 332 aaPredicted RBP8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 KLK13Q9UKR3 277 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 NFE2L3Q9Y4A8 694 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 ANAPC1Q9H1A4 1944 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 MYO16Q9Y6X6 1858 aa8.66□□□□□ -1.02
PDXDC1-208ENST00000563522 ABCA7Q8IZY2 2146 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ATXN2Q99700 1313 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 LCE2BO14633 110 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 GREM1O60565 184 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 TLR5O60602 858 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 PHACTR2O75167 634 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 GJB3O75712 270 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 SYT1P21579 422 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CYP2J2P51589 502 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ZNF132P52740 706 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ASIC1P78348 528 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CLDN10P78369 228 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CEBPZQ03701 1054 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 RING1Q06587 406 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 IFRD2Q12894 506 aaPredicted RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ANO4Q32M45 955 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 WDR45BQ5MNZ6 344 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 KIAA1211LQ6NV74 962 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 KLHDC10Q6PID8 442 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 LYPD8Q6UX82 237 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CLEC17AQ6ZS10 378 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 PAQR9Q6ZVX9 377 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 HSCBQ8IWL3 235 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CHPFQ8IZ52 775 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 PDILTQ8N807 584 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 NAT16Q8N8M0 369 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 IQUBQ8NA54 791 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 SCAMP5Q8TAC9 235 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 IPO4Q8TEX9 1081 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 SCFD1Q8WVM8 642 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CCDC127Q96BQ5 260 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ZNF419Q96HQ0 510 aaPredicted RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 HSPA12BQ96MM6 686 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 KCNK16Q96T55 309 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 NACA2Q9H009 215 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ZSCAN16Q9H4T2 348 aaPredicted RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CCSER2Q9H7U1 834 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 MAGEF1Q9HAY2 307 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 CSNK1G1Q9HCP0 422 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ZDHHC4Q9NPG8 344 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 TLR8Q9NR97 1041 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 DNAJC17Q9NVM6 304 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 GMIPQ9P107 970 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 LSM7Q9UK45 103 aaKnown RBP8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 HCN2Q9UL51 889 aa8.65□□□□□ -1.02
PDXDC1-208ENST00000563522 ATG2BQ96BY7 2078 aa8.65□□□□□ -1.03
PDXDC1-208ENST00000563522 NUP205Q92621 2012 aa8.64□□□□□ -1.03
PDXDC1-208ENST00000563522 IGF2RP11717 2491 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms