RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 C16orf71Q8IYS4 520 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 IPCEF1Q8WWN9 437 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 TSR2Q969E8 191 aaKnown RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 HIC2Q96JB3 615 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 VPS50Q96JG6 964 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 VCPIP1Q96JH7 1222 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 FOXP1Q9H334 677 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 HEY2Q9UBP5 337 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 MAFFQ9ULX9 164 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 ZMYM2Q9UBW7 1377 aa3.97□□□□□ -1.77
HMGB1P33-201ENST00000563485 LOC105371045A0A1W2PR82 267 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 CNOT3O75175 753 aaKnown RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 WDR47O94967 919 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 TMEM191BP0C7N4 346 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 TMEM225BP0DP42 221 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 CTSAP10619 480 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 RHCEP18577 417 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 RHDQ02161 417 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 CCDC15Q0P6D6 951 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 SEMA5AQ13591 1074 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 FHL3Q13643 280 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 KPNB1Q14974 876 aaKnown RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 CYB5RLQ6IPT4 315 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZNF517Q6ZMY9 492 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 DEF8Q6ZN54 512 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 C14orf80Q86SX3 495 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 ANKRD13BQ86YJ7 626 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 P3H2Q8IVL5 708 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 FSTL5Q8N475 847 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZNF548Q8NEK5 533 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZDHHC12Q96GR4 267 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 PRR11Q96HE9 360 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 APOL5Q9BWW9 433 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 VPS45Q9NRW7 570 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 OBP2AQ9NY56 170 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 COL15A1P39059 1388 aa3.96□□□□□ -1.78
HMGB1P33-201ENST00000563485 TTC3P53804 2025 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GOLGA6CA6NDK9 693 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GOLGA6BA6NDN3 693 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 MYMKA6NI61 221 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 RRHO14718 337 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 INSIG1O15503 277 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 MBPP02686 304 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 ANXA2P07355 339 aaKnown RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GOLGA6DP0CG33 693 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 TACR3P29371 465 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GALNSP34059 522 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 RPS13P62277 151 aaKnown RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SRSF1Q07955 248 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 MTAPQ13126 283 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 PFKFB3Q16875 520 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GFOD2Q3B7J2 385 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SLC9C1Q4G0N8 1177 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 RRAGBQ5VZM2 374 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SAMD14Q8IZD0 417 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SDR16C5Q8N3Y7 309 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 FAM71DQ8N9W8 422 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 MBD3L2Q8NHZ7 208 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 FAM227BQ96M60 508 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 BRIP1Q9BX63 1249 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 BTBD1Q9H0C5 482 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 ZCWPW1Q9H0M4 648 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 SLC25A32Q9H2D1 315 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 EBF3Q9H4W6 596 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 GOLGA6AQ9NYA3 693 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 CORO2BQ9UQ03 480 aa3.95□□□□□ -1.78
HMGB1P33-201ENST00000563485 A0A087WZ62 844 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 C16orf96A6NNT2 1141 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 INPPL1O15357 1258 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 SNHG28P0DPA3 235 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 WDR5P61964 334 aaKnown RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 RAE1P78406 368 aaKnown RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 HSF1Q00613 529 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 DNASE1L3Q13609 305 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 TWIST1Q15672 202 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 LEXMQ3ZCV2 418 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 RNF44Q7L0R7 432 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 TTC8Q8TAM2 541 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 WIPF2Q8TF74 440 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 STRBPQ96SI9 672 aaKnown RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 CINPQ9BW66 212 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 SCNM1Q9BWG6 230 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 TM2D2Q9BX73 214 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 ADGRE3Q9BY15 652 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 NUAK2Q9H093 628 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 MLXIPLQ9NP71 852 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 HEYLQ9NQ87 328 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 SEMA5BQ9P283 1151 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 SNX13Q9Y5W8 968 aa3.94□□□□□ -1.78
HMGB1P33-201ENST00000563485 C2CD4BA6NLJ0 364 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 TMIGD3P0DMS9 266 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 PSG1P11464 419 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 HOXB6P17509 224 aaKnown RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 RPL17P18621 184 aaKnown RBP3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 SCP2P22307 547 aa3.93□□□□□ -1.78
HMGB1P33-201ENST00000563485 ATICP31939 592 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms