RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PIK3CAP42336 1068 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 RPL6Q02878 288 aaKnown RBP17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 PREPLQ4J6C6 727 aaPredicted RBP17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 ATL3Q6DD88 541 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 UNQ6494/PRO21346Q6UXR6 183 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 GABRG3Q99928 467 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 BBS2Q9BXC9 721 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 SLC6A17Q9H1V8 727 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 CD93Q9NPY3 652 aa17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.72■□□□□ 0.43
HDGFL3-203ENST00000563404 AP5Z1O43299 807 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 TRIM49P0CI25 452 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 TRIM49CP0CI26 452 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 RARGP13631 454 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 NDUFV2P19404 249 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 ACO1P21399 889 aaKnown RBP17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 PPP3CAQ08209 521 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 Q6ZNB5 142 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 PIP4P1Q86T03 277 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 SLC41A1Q8IVJ1 513 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 TAS1R2Q8TE23 839 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 IPO4Q8TEX9 1081 aaKnown RBP17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 CFAP45Q9UL16 551 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 TRAF3IP3Q9Y228 551 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 HPSEQ9Y251 543 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 RAD54BQ9Y620 910 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 MYH10P35580 1976 aa17.71■□□□□ 0.43
HDGFL3-203ENST00000563404 PI4KAP42356 2102 aa17.71■□□□□ 0.42
HDGFL3-203ENST00000563404 PCDH15Q96QU1 1955 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 IGF2RP11717 2491 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 CFIP05156 583 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 GCLMP48507 274 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 VAMP7P51809 220 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 KIF11P52732 1056 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 NUDT18Q6ZVK8 323 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 CHPFQ8IZ52 775 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 BHMTQ93088 406 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 XPO6Q96QU8 1125 aaKnown RBP17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 SCNM1Q9BWG6 230 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 ADAM33Q9BZ11 813 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 CAPN10Q9HC96 672 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 PLK2Q9NYY3 685 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 WDR35Q9P2L0 1181 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 ZMIZ1Q9ULJ6 1067 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 CYP8B1Q9UNU6 501 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 FRMD4BQ9Y2L6 1034 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 PCDHA5Q9Y5H7 936 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 ADAMTS9Q9P2N4 1935 aa17.7■□□□□ 0.42
HDGFL3-203ENST00000563404 CEP192Q8TEP8 1941 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 MAPK13O15264 365 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CALUO43852 315 aaPredicted RBP17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CILPO75339 1184 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 KLKB1P03952 638 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CD58P19256 250 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CMA1P23946 247 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 HOXD12P35452 270 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 DGKGP49619 791 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 SEMA3BQ13214 749 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 DUOXA1Q1HG43 343 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 KLHDC10Q6PID8 442 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 SLC36A4Q6YBV0 504 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 KDF1Q8NAX2 398 aaPredicted RBP17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 OR2I1PQ8NGU4 316 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 GATA6Q92908 595 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 NT5C1AQ9BXI3 368 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CYP3A43Q9HB55 503 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 PNPLA8Q9NP80 782 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CACNA2D2Q9NY47 1150 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 DNMT3LQ9UJW3 386 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 LSM7Q9UK45 103 aaKnown RBP17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 FBXO10Q9UK96 956 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 SLC6A14Q9UN76 642 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 CACNA1EQ15878 2313 aa17.69■□□□□ 0.42
HDGFL3-203ENST00000563404 SPAARA0A1B0GVQ0 90 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 STC2O76061 302 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 SERPINF2P08697 491 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 NR2F2P24468 414 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 DPP6P42658 865 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 NFIL3Q16649 462 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 C10orf120Q5SQS8 335 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 PPP1R26Q5T8A7 1209 aaPredicted RBP17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 HSCBQ8IWL3 235 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 CEP76Q8TAP6 659 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 MRGPRX1Q96LB2 322 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 GTPBP2Q9BX10 602 aaKnown RBP17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 NIF3L1Q9GZT8 377 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 MAPK8IP1Q9UQF2 711 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 USP3Q9Y6I4 520 aa17.68■□□□□ 0.42
HDGFL3-203ENST00000563404 PCNX2A6NKB5 2137 aa17.67■□□□□ 0.42
HDGFL3-203ENST00000563404 UPK3BL1B0FP48 263 aa17.67■□□□□ 0.42
HDGFL3-203ENST00000563404 UPK3BL2E5RIL1 263 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms