RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 C12orf40Q86WS4 652 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 ETFBKMTQ8IXQ9 262 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 RPLP0P6Q8NHW5 317 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 TUBGCP2Q9BSJ2 902 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 EPC1Q9H2F5 836 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 NDST4Q9H3R1 872 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 SAMSN1Q9NSI8 373 aaKnown RBP19.94■□□□□ 0.78
TRADD-203ENST00000563348 MARCH2Q9P0N8 246 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 RASAL2Q9UJF2 1139 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 STRIP2Q9ULQ0 834 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 SLC8A2Q9UPR5 921 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 ZNF510Q9Y2H8 683 aa19.94■□□□□ 0.78
TRADD-203ENST00000563348 YJEFN3A6XGL0 299 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 E7ENQ6 273 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 KAT7O95251 611 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 KLKB1P03952 638 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 APODP05090 189 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 LCP1P13796 627 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 HOXC13P31276 330 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 GRIA2P42262 883 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 GPD2P43304 727 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 DAOAP59103 153 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 APBA1Q02410 837 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 MESP2Q0VG99 397 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 ANO4Q32M45 955 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 MIIPQ5JXC2 388 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 HEATR6Q6AI08 1181 aaKnown RBP19.93■□□□□ 0.78
TRADD-203ENST00000563348 SYT13Q7L8C5 426 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 CAMKK1Q8N5S9 505 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 ENOX1Q8TC92 643 aaKnown RBP19.93■□□□□ 0.78
TRADD-203ENST00000563348 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 DCLK3Q9C098 648 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 ARHGEF4Q9NR80 690 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 OLA1Q9NTK5 396 aaKnown RBP19.93■□□□□ 0.78
TRADD-203ENST00000563348 POLR3BQ9NW08 1133 aaPredicted RBP19.93■□□□□ 0.78
TRADD-203ENST00000563348 MARK1Q9P0L2 795 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 WDR35Q9P2L0 1181 aa19.93■□□□□ 0.78
TRADD-203ENST00000563348 MYO16Q9Y6X6 1858 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 CCDC163A0A0D9SF12 145 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 TULP3O75386 442 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 PRKCSHP14314 528 aaPredicted RBP19.92■□□□□ 0.78
TRADD-203ENST00000563348 CNR2P34972 360 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 RPL34P49207 117 aaKnown RBP19.92■□□□□ 0.78
TRADD-203ENST00000563348 MRPS21P82921 87 aaKnown RBP19.92■□□□□ 0.78
TRADD-203ENST00000563348 MEA1Q16626 185 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 ARHGAP44Q17R89 818 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 HSP90AA4PQ58FG1 418 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 PHTF2Q8N3S3 785 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 NAT16Q8N8M0 369 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 RNF139Q8WU17 664 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 ZNF606Q8WXB4 792 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 IRGQQ8WZA9 623 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 ACDQ96AP0 544 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 SIX2Q9NPC8 291 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 ABCC13Q9NSE7 274 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 DEC1Q9P2X7 70 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 SPTBN4Q9H254 2564 aa19.92■□□□□ 0.78
TRADD-203ENST00000563348 SLC12A8A0AV02 714 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 BECN2A8MW95 431 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 KCNJ18B7U540 433 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 MED7O43513 233 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 HRO43593 1189 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 LETM1O95202 739 aaPredicted RBP19.91■□□□□ 0.78
TRADD-203ENST00000563348 TNFRSF4P43489 277 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 KCNJ12Q14500 433 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 PREPLQ4J6C6 727 aaPredicted RBP19.91■□□□□ 0.78
TRADD-203ENST00000563348 C2orf27AQ580R0 203 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 WDR5BQ86VZ2 330 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 SHC3Q92529 594 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 EDEM1Q92611 657 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 RUBCNQ92622 972 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 BBS2Q9BXC9 721 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 ACP6Q9NPH0 428 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 NFE2L3Q9Y4A8 694 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 SDK1Q7Z5N4 2213 aa19.91■□□□□ 0.78
TRADD-203ENST00000563348 ANTXRLA6NF34 631 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 PIK3R2O00459 728 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 FBXO21O94952 628 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 MBD3O95983 291 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 HMBSP08397 361 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 EEF1GP26641 437 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 GNA15P30679 374 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 CORO1AP31146 461 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 USP8P40818 1118 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 SEC13P55735 322 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 DMC1Q14565 340 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 TRIP4Q15650 581 aaPredicted RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 TCP11X2Q5H9J9 407 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 DPY19L2P1Q6NXN4 242 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 DENND1BQ6P3S1 775 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 TPGS1Q6ZTW0 290 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 SFTPA1Q8IWL2 248 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 STK32AQ8WU08 396 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 XPO6Q96QU8 1125 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 DNAJC12Q9UKB3 198 aa19.9■□□□□ 0.78
TRADD-203ENST00000563348 AGO1Q9UL18 857 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 SMG5Q9UPR3 1016 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 HBS1LQ9Y450 684 aaKnown RBP19.9■□□□□ 0.78
TRADD-203ENST00000563348 CFAP54Q96N23 3096 aa19.89■□□□□ 0.78
TRADD-203ENST00000563348 TBC1D3BA6NDS4 549 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms