RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TRIM50Q86XT4 487 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 CRLF3Q8IUI8 442 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 NUDCD3Q8IVD9 361 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 PCDH19Q8TAB3 1148 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 STMN2Q93045 179 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 SIGLEC10Q96LC7 697 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 EBNA1BP2Q99848 306 aaKnown RBP13.57□□□□□ -0.24
USB1-207ENST00000563149 MINDY3Q9H8M7 445 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 XAB2Q9HCS7 855 aaKnown RBP13.57□□□□□ -0.24
USB1-207ENST00000563149 PCDHA11Q9Y5I1 949 aa13.57□□□□□ -0.24
USB1-207ENST00000563149 ZSWIM8A7E2V4 1837 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 FAM237BA0A1B0GVD1 139 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 CXorf49A8MYA2 514 aaPredicted RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 SNNO75324 88 aaPredicted RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 USP2O75604 605 aaPredicted RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 NEBLO76041 1014 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 PFKMP08237 780 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 SKIP12755 728 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 CYP3A5P20815 502 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 PGM1P36871 562 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 CLCN3P51790 818 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 SARNPP82979 210 aaKnown RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 KLC1Q07866 573 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 BST1Q10588 318 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 KPNB1Q14974 876 aaKnown RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 AMHR2Q16671 573 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 SLC10A6Q3KNW5 377 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 DNAL1Q4LDG9 190 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 TEX44Q53QW1 395 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 UNC5AQ6ZN44 842 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 TMEM110Q86TL2 294 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 PPFIBP2Q8ND30 876 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 ACMSDQ8TDX5 336 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 FAM172AQ8WUF8 416 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 SNRNP25Q9BV90 132 aaKnown RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 SLC4A5Q9BY07 1137 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 C1orf21Q9H246 121 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 PDZD7Q9H5P4 517 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 STN1Q9H668 368 aaKnown RBP13.56□□□□□ -0.24
USB1-207ENST00000563149 PRDM16Q9HAZ2 1276 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 HEY1Q9Y5J3 304 aa13.56□□□□□ -0.24
USB1-207ENST00000563149 IRF6O14896 467 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 C22orf31O95567 290 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 BPGMP07738 259 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 APRTP07741 180 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 SCNN1AP37088 669 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 WASHC5Q12768 1159 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 RCN1Q15293 331 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 CDO1Q16878 200 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 PKDCCQ504Y2 493 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 C6orf163Q5TEZ5 329 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 SNX30Q5VWJ9 437 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 OLFML1Q6UWY5 402 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 KYAT3Q6YP21 454 aaKnown RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 NET1Q7Z628 596 aaPredicted RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 SESTD1Q86VW0 696 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 ARMC2Q8NEN0 867 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 TRAPPC12Q8WVT3 735 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 FAM167BQ9BTA0 163 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NMUR2Q9GZQ4 415 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 SMYD2Q9NRG4 433 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NMRK1Q9NWW6 199 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 DPP3Q9NY33 737 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 ERAP1Q9NZ08 941 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 DNAJB4Q9UDY4 337 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 GTF2IRD1Q9UHL9 959 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 TAGLN3Q9UI15 199 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 BRCA1P38398 1863 aaKnown RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 B2RBV5 119 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 SPECC1L-ADORA2AF8WAN1 911 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 GJB1P08034 283 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 MLNP12872 115 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 PTPN9P43378 593 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 AP1B1Q10567 949 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NAB1Q13506 487 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 SEMA5AQ13591 1074 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 CHI3L2Q15782 390 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 DPYSL2Q16555 572 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 GOLGA7BQ2TAP0 167 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 LRRC74BQ6ZQY2 392 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 PRR11Q96HE9 360 aaPredicted RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 ASCC2Q9H1I8 757 aaPredicted RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 VCXQ9H320 206 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 FAM96AQ9H5X1 160 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 NGRNQ9NPE2 291 aaKnown RBP13.55□□□□□ -0.24
USB1-207ENST00000563149 ARHGEF4Q9NR80 690 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 THAP1Q9NVV9 213 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 ANGPTL2Q9UKU9 493 aa13.55□□□□□ -0.24
USB1-207ENST00000563149 PTPRFP10586 1907 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms